Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq76 318 6e-82 seq53 129 6e-25 seq249 111 2e-19 seq404 95.1 1e-14 seq133 95.1 1e-14 >seq76 Length=103561 Score = 318 bits (352), Expect = 6e-82 Identities = 1019/1551 (66%), Gaps = 65/1551 (4%) Strand=Plus/Minus Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319 || || ||||| |||||||| || | ||| || || | || | |||| || | || Sbjct 3552 TTGACGACCTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGC 3493 Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379 || || | ||||||||||||| || || | ||||| || || |||||| |||| Sbjct 3492 TCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTAGG 3433 Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAG 148439 ||||||||||| |||| |||| | | || || | || || | ||||||||||| Sbjct 3432 AGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCTTTGAGCGAGGCCCAGTCCCAC 3373 Query 148440 AGCGGCGACGGTG-TCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCT 148498 || | || || | | || |||||||||||| ||||||||||||| | | | || Sbjct 3372 AG-GTCGCTGGGGGTGACATTCCACATGTCGAACTGCAGAATGCCTTGCGAAACAGGAGA 3314 Query 148499 GCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGC 148558 |||||| || | ||| | || | | | || | ||||| || || || Sbjct 3313 GCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGC 3254 Query 148559 GCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTT---TC 148615 | ||| ||| || |||||| ||| ||| | || ||| | || | | |||| || Sbjct 3253 GGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGC-GTGCGGGC--CTCGGCAGACTC 3197 Query 148616 GTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGG 148675 | | ||||| || || | || || ||||| || ||||| || || || ||||| || Sbjct 3196 GAAGGGCATGCGTAGAGCTAGGAAGGCATCGGCTAGACCCTGAACACCAACTCCAATAGG 3137 Query 148676 CCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC---GGATAGTGGTTGCGGTCGAT 148732 ||||| || ||| | | || |||| || ||||| | ||| |||||| Sbjct 3136 GCGGTGGCGCATATTGCTGTTATGAGC---CTCGGGCACGGGATAATAATTGACGTCGAT 3080 Query 148733 GATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGC------AATTCAAA 148786 ||| || || |||||||| || ||||| || || | ||||| || ||| | Sbjct 3079 GATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTGCAGCTTCTGGAAGTCATA 3020 Query 148787 ATCGTACTTGTC---ATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACAC 148843 ||| ||||| ||| || | | |||| | ||| | ||||| ||||||||||| Sbjct 3019 CTCGCCCTTGTTGTAATCGACAAACGA-CGGT--AGGGCCAGCGAGGCCAGATTGCACAC 2963 Query 148844 GGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGAT 148903 || |||||| ||||||| |||||| | |||||||| |||||| ||| || ||| Sbjct 2962 AGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGAT 2903 Query 148904 CACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963 ||||| |||||| || |||||||| |||||||| || ||||||||||||||| |||| Sbjct 2902 AGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGG 2843 Query 148964 TCCGCCAGTTTCCACCTGCGTTTCCACTATGA---ACCGATGCAGGTCCTGCGCGCGCAC 149020 || || || || | || | ||| ||| || || | ||| || | Sbjct 2842 GTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACC-AT--AGCTTCTGGGC-----C 2791 Query 149021 TTGCTGCTC-----GTAGCGACCCTCCTGCTCGTA--TAAAGTATACAGCCGCTCGAACG 149073 ||| || | | ||| ||||| |||||| | ||| | |||| |||||| Sbjct 2790 TTGATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCC--TCGAACT 2733 Query 149074 CCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGC 149133 | || |||||||| ||| | ||||||||||||| || ||||||||||| | ||| | Sbjct 2732 CGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCCAGTTGG 2673 Query 149134 CGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGC 149193 ||| | | || |||||||| ||||| ||||| | ||| || || | ||||||| Sbjct 2672 CGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGC 2613 Query 149194 GCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCG 149253 | || || || ||| ||| ||| |||| ||| | ||| | || | Sbjct 2612 GGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGACATCGG 2553 Query 149254 CGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGA 149310 | ||||||||||| | ||| | || | || || |||| ||||| |||||||| | Sbjct 2552 CATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTCAA 2493 Query 149311 CGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGT 149370 | | ||| | ||||||| || || || | ||| || | ||||| | | ||||||| Sbjct 2492 CATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGACGTGCCGT 2433 Query 149371 TAGT-AGAGCTAATG--CGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGC 149427 |||| ||| |||| ||| |||| || || | ||| ||||| | ||| || | Sbjct 2432 TAGTGCCAGC-AATGTACGA--GCCGGTGGCGCGGATACGGTGGACGTTCAGGCCAATAC 2376 Query 149428 CGCCGCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTAGATGCCCTCGATG 149486 | ||| | ||| ||||| || | |||| | ||||| |||||| ||||| ||| Sbjct 2375 CACCGGCCATCTTGGAGATCATAGCACAAGTCTTC-AGCGTATCGTAGATACCCTCAATG 2317 Query 149487 CTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCC 149546 ||||| ||||||| | || ||||| || | | || | ||||||| || Sbjct 2316 CTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTGGGCCTGCGGCGTGCCAGCG 2257 Query 149547 GCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATCTCGTACGACTC 149605 ||||| || || ||||||||| |||| || |||| ||| | ||||| ||| Sbjct 2256 TTGAACAGCGTAGGTGAGGCGTGTGTGAAAAGCTTACTGG-ACATGTAGTTGTACGTCTC 2198 Query 149606 GAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTG 149665 |||||| ||||| | ||||| ||| || | ||| || ||||| | ||| ||||| Sbjct 2197 GAGCACACGGTCGACACGGTCGCCCCAGATACCGACGGCAACACGCATGATCATGTGCTG 2138 Query 149666 CGGTCGCTCCGCCA-CTTTGTTTCCAATTTTGAGCAAGTAGCCGTT--TTCTAGTGTCTT 149722 ||| ||||| | | ||| ||||| ||||||| || || | || | || || Sbjct 2137 CGGACGCTCGACGATCTTGCCGTCCAA-CTTGAGCAGATA--CGATCGCTCCAAGGTTTT 2081 Query 149723 GTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTC 149773 |||||||||||| ||||| |||||| || ||| | ||||| | ||| Sbjct 2080 AAAGCCAAAGTACTGGTAGTTAAAGTCACGATCGTACACGATGGCAGAGTC 2030 >seq53 Length=118516 Score = 129 bits (142), Expect = 6e-25 Identities = 355/529 (67%), Gaps = 29/529 (5%) Strand=Plus/Plus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || |||||||| |||||||| || |||||| ||| |||||||| | Sbjct 89755 CTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTCTC 89814 Query 120411 CATAAACTCGAACGGGTTGCTCGC--GTTAAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468 ||| || ||||| |||||| | || | || | | ||| | ||| | || | Sbjct 89815 CATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCG--TTGCCAAGGGCCACTAAG 89872 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAA- 120527 || ||||| || || |||||||| |||| ||| | ||||||||||| || || Sbjct 89873 AGACGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTAAA 89932 Query 120528 -CGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACA 120586 ||| | || | ||| || | ||||||||||||||| | || || || ||| | Sbjct 89933 CCGCAA--GGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATGA 89990 Query 120587 TG-GCGAGCATAGTG--TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGC 120643 | || | ||| | ||| || |||| || | | | | | | |||||| Sbjct 89991 TTTGCTCGACAAGTTCCTTGCCAGGGCGGTTGT--TC-AGGTGGGA---GAACAACAGGC 90044 Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703 | |||||||| |||||||| ||||| || || || ||||||||||| ||| ||||||| Sbjct 90045 AGGCAAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGGC 90104 Query 120704 CGGGCATGATGCCTTTCGTCTTG---ATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGA 120760 ||||||| | || || |||| | | || |||| ||||||| || ||||||| Sbjct 90105 CGGGCATCAGACC--ACG-CTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCAGAAAAGA 90161 Query 120761 ACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGT 120820 | | ||| || || ||||| |||| | ||||| || || || | ||| |||| Sbjct 90162 AGATGCCTTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTG-ATTCT--CTGT 90218 Query 120821 C---GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866 | ||||||||| | ||||| ||||| || ||| | ||| || || Sbjct 90219 CGCAGATCCACTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAAT 90267 >seq249 Length=46353 Score = 111 bits (122), Expect = 2e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| || || || ||||| ||| | || | | | ||||| ||||||||||| Sbjct 8311 GTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCA-TCCTCCAGCTGCTTGCC 8253 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| || |||||||| || |||||||| || |||||||| |||||| || Sbjct 8252 GGCAAAAATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGGATCTTCGATTT 8193 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| || |||| || || || || | ||||| ||||||||| || ||||| Sbjct 8192 GACATTGTCAATAGTATCGGAGGATTCGACTTCTAGGGTGATGGTTTTGCCAGTGAGAGT 8133 Query 133643 TTTTACGAAAATCTGCAT 133660 || || ||||| ||||| Sbjct 8132 CTTGACAAAAATTTGCAT 8115 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| || |||| || |||||||| || |||||||| || |||||| Sbjct 8041 TCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGGATACCCTCCTTG 7982 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| |||| | |||| || |||| || || || || | ||||| | Sbjct 7981 TCTTGGATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGACTTCTAGGGTGATG 7922 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGA 133650 || || ||||| || ||||| |||| Sbjct 7921 GTCTTTCCGGTAAGGGTTTTGACGA 7897 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || ||| ||| |||||| || ||||| || Sbjct 7790 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACC-GTCCTCAAGTTGCTTTCC 7732 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || ||||||||||| || || || || ||||| || ||||| ||| Sbjct 7731 GGCGAAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTCGACTT 7672 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | || | ||||||| | ||| || || | |||| ||| |||||||| Sbjct 7671 GACATTGTCGATGGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 7618 >seq404 Length=24851 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531 ||||| || ||||| ||| || ||| | | | ||||| ||||||||||| ||| | || Sbjct 18461 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCTAGCTGCTTGCCAGCGAAGAT 18403 Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591 || ||||| || || || || ||||| ||||| || |||||| ||||| | || Sbjct 18402 CAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGTC 18343 Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651 | ||||| | || ||| || || | ||||| || || || || || || || ||||| Sbjct 18342 GATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGACGAA 18283 Query 133652 AATCTGCAT 133660 ||||||||| Sbjct 18282 AATCTGCAT 18274 >seq133 Length=77988 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| ||| | || || ||||| ||||| || || ||||| |||||| Sbjct 32219 TCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTG 32278 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | || | |||||| | || ||| || || | ||| | | Sbjct 32279 TCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCCAGGGTAATG 32338 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652 || || || ||||| || || |||||| Sbjct 32339 GTCTTACCCGTCAGGGTCTTGACGAAA 32365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483415488413960