Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq76 318 6e-82
seq53 129 6e-25
seq249 111 2e-19
seq404 95.1 1e-14
seq133 95.1 1e-14
>seq76
Length=103561
Score = 318 bits (352), Expect = 6e-82
Identities = 1019/1551 (66%), Gaps = 65/1551 (4%)
Strand=Plus/Minus
Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319
|| || ||||| |||||||| || | ||| || || | || | |||| || | ||
Sbjct 3552 TTGACGACCTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGC 3493
Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379
|| || | ||||||||||||| || || | ||||| || || |||||| ||||
Sbjct 3492 TCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTAGG 3433
Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAG 148439
||||||||||| |||| |||| | | || || | || || | |||||||||||
Sbjct 3432 AGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCTTTGAGCGAGGCCCAGTCCCAC 3373
Query 148440 AGCGGCGACGGTG-TCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCT 148498
|| | || || | | || |||||||||||| ||||||||||||| | | | ||
Sbjct 3372 AG-GTCGCTGGGGGTGACATTCCACATGTCGAACTGCAGAATGCCTTGCGAAACAGGAGA 3314
Query 148499 GCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGC 148558
|||||| || | ||| | || | | | || | ||||| || || ||
Sbjct 3313 GCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGC 3254
Query 148559 GCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAGCGCCGCCGACTCGCTT---TC 148615
| ||| ||| || |||||| ||| ||| | || ||| | || | | |||| ||
Sbjct 3253 GGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGC-GTGCGGGC--CTCGGCAGACTC 3197
Query 148616 GTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGG 148675
| | ||||| || || | || || ||||| || ||||| || || || ||||| ||
Sbjct 3196 GAAGGGCATGCGTAGAGCTAGGAAGGCATCGGCTAGACCCTGAACACCAACTCCAATAGG 3137
Query 148676 CCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGC---GGATAGTGGTTGCGGTCGAT 148732
||||| || ||| | | || |||| || ||||| | ||| ||||||
Sbjct 3136 GCGGTGGCGCATATTGCTGTTATGAGC---CTCGGGCACGGGATAATAATTGACGTCGAT 3080
Query 148733 GATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGC------AATTCAAA 148786
||| || || |||||||| || ||||| || || | ||||| || ||| |
Sbjct 3079 GATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTGCAGCTTCTGGAAGTCATA 3020
Query 148787 ATCGTACTTGTC---ATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCACAC 148843
||| ||||| ||| || | | |||| | ||| | ||||| |||||||||||
Sbjct 3019 CTCGCCCTTGTTGTAATCGACAAACGA-CGGT--AGGGCCAGCGAGGCCAGATTGCACAC 2963
Query 148844 GGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGAT 148903
|| |||||| ||||||| |||||| | |||||||| |||||| ||| || |||
Sbjct 2962 AGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGAT 2903
Query 148904 CACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGG 148963
||||| |||||| || |||||||| |||||||| || ||||||||||||||| ||||
Sbjct 2902 AGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGG 2843
Query 148964 TCCGCCAGTTTCCACCTGCGTTTCCACTATGA---ACCGATGCAGGTCCTGCGCGCGCAC 149020
|| || || || | || | ||| ||| || || | ||| || |
Sbjct 2842 GTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACC-AT--AGCTTCTGGGC-----C 2791
Query 149021 TTGCTGCTC-----GTAGCGACCCTCCTGCTCGTA--TAAAGTATACAGCCGCTCGAACG 149073
||| || | | ||| ||||| |||||| | ||| | |||| ||||||
Sbjct 2790 TTGATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCC--TCGAACT 2733
Query 149074 CCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACACGC 149133
| || |||||||| ||| | ||||||||||||| || ||||||||||| | ||| |
Sbjct 2732 CGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCCAGTTGG 2673
Query 149134 CGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGTCGC 149193
||| | | || |||||||| ||||| ||||| | ||| || || | |||||||
Sbjct 2672 CGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGC 2613
Query 149194 GCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGTCCG 149253
| || || || ||| ||| ||| |||| ||| | ||| | || |
Sbjct 2612 GGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGACATCGG 2553
Query 149254 CGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGCCGCCCTGGTCGA 149310
| ||||||||||| | ||| | || | || || |||| ||||| |||||||| |
Sbjct 2552 CATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTCAA 2493
Query 149311 CGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCACTGGCAGTGCCGT 149370
| | ||| | ||||||| || || || | ||| || | ||||| | | |||||||
Sbjct 2492 CATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGACGTGCCGT 2433
Query 149371 TAGT-AGAGCTAATG--CGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGATGC 149427
|||| ||| |||| ||| |||| || || | ||| ||||| | ||| || |
Sbjct 2432 TAGTGCCAGC-AATGTACGA--GCCGGTGGCGCGGATACGGTGGACGTTCAGGCCAATAC 2376
Query 149428 CGCCGCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTAGATGCCCTCGATG 149486
| ||| | ||| ||||| || | |||| | ||||| |||||| ||||| |||
Sbjct 2375 CACCGGCCATCTTGGAGATCATAGCACAAGTCTTC-AGCGTATCGTAGATACCCTCAATG 2317
Query 149487 CTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCCGGCC 149546
||||| ||||||| | || ||||| || | | || | ||||||| ||
Sbjct 2316 CTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTGGGCCTGCGGCGTGCCAGCG 2257
Query 149547 GCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATCTCGTACGACTC 149605
||||| || || ||||||||| |||| || |||| ||| | ||||| |||
Sbjct 2256 TTGAACAGCGTAGGTGAGGCGTGTGTGAAAAGCTTACTGG-ACATGTAGTTGTACGTCTC 2198
Query 149606 GAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATATGCTG 149665
|||||| ||||| | ||||| ||| || | ||| || ||||| | ||| |||||
Sbjct 2197 GAGCACACGGTCGACACGGTCGCCCCAGATACCGACGGCAACACGCATGATCATGTGCTG 2138
Query 149666 CGGTCGCTCCGCCA-CTTTGTTTCCAATTTTGAGCAAGTAGCCGTT--TTCTAGTGTCTT 149722
||| ||||| | | ||| ||||| ||||||| || || | || | || ||
Sbjct 2137 CGGACGCTCGACGATCTTGCCGTCCAA-CTTGAGCAGATA--CGATCGCTCCAAGGTTTT 2081
Query 149723 GTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTC 149773
|||||||||||| ||||| |||||| || ||| | ||||| | |||
Sbjct 2080 AAAGCCAAAGTACTGGTAGTTAAAGTCACGATCGTACACGATGGCAGAGTC 2030
>seq53
Length=118516
Score = 129 bits (142), Expect = 6e-25
Identities = 355/529 (67%), Gaps = 29/529 (5%)
Strand=Plus/Plus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| || || || |||||||| |||||||| || |||||| ||| |||||||| |
Sbjct 89755 CTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTCTC 89814
Query 120411 CATAAACTCGAACGGGTTGCTCGC--GTTAAAGTATTTCGGCTGGCCCAACTGTACGAGC 120468
||| || ||||| |||||| | || | || | | ||| | ||| | || |
Sbjct 89815 CATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCG--TTGCCAAGGGCCACTAAG 89872
Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAA- 120527
|| ||||| || || |||||||| |||| ||| | ||||||||||| || ||
Sbjct 89873 AGACGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTAAA 89932
Query 120528 -CGCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACA 120586
||| | || | ||| || | ||||||||||||||| | || || || ||| |
Sbjct 89933 CCGCAA--GGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATGA 89990
Query 120587 TG-GCGAGCATAGTG--TGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGC 120643
| || | ||| | ||| || |||| || | | | | | | ||||||
Sbjct 89991 TTTGCTCGACAAGTTCCTTGCCAGGGCGGTTGT--TC-AGGTGGGA---GAACAACAGGC 90044
Query 120644 ACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGC 120703
| |||||||| |||||||| ||||| || || || ||||||||||| ||| |||||||
Sbjct 90045 AGGCAAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGGC 90104
Query 120704 CGGGCATGATGCCTTTCGTCTTG---ATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGA 120760
||||||| | || || |||| | | || |||| ||||||| || |||||||
Sbjct 90105 CGGGCATCAGACC--ACG-CTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCAGAAAAGA 90161
Query 120761 ACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGT 120820
| | ||| || || ||||| |||| | ||||| || || || | ||| ||||
Sbjct 90162 AGATGCCTTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTG-ATTCT--CTGT 90218
Query 120821 C---GATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCAT 120866
| ||||||||| | ||||| ||||| || ||| | ||| || ||
Sbjct 90219 CGCAGATCCACTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAAT 90267
>seq249
Length=46353
Score = 111 bits (122), Expect = 2e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| || || || ||||| ||| | || | | | ||||| |||||||||||
Sbjct 8311 GTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCA-TCCTCCAGCTGCTTGCC 8253
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| |||| || |||||||| || |||||||| || |||||||| |||||| ||
Sbjct 8252 GGCAAAAATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGGATCTTCGATTT 8193
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| || |||| || || || || | ||||| ||||||||| || |||||
Sbjct 8192 GACATTGTCAATAGTATCGGAGGATTCGACTTCTAGGGTGATGGTTTTGCCAGTGAGAGT 8133
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || ||||| |||||
Sbjct 8132 CTTGACAAAAATTTGCAT 8115
Score = 95.1 bits (104), Expect = 1e-14
Identities = 108/145 (74%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| ||||||||||| || |||| || |||||||| || |||||||| || ||||||
Sbjct 8041 TCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGGATACCCTCCTTG 7982
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| |||| | |||| || |||| || || || || | ||||| |
Sbjct 7981 TCTTGGATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGACTTCTAGGGTGATG 7922
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGA 133650
|| || ||||| || ||||| ||||
Sbjct 7921 GTCTTTCCGGTAAGGGTTTTGACGA 7897
Score = 86.0 bits (94), Expect = 6e-12
Identities = 125/174 (72%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| || ||| ||| |||||| || ||||| ||
Sbjct 7790 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACC-GTCCTCAAGTTGCTTTCC 7732
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| || ||||||||||| || || || || ||||| || ||||| |||
Sbjct 7731 GGCGAAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGAATCTTCGACTT 7672
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|| | || | ||||||| | ||| || || | |||| ||| ||||||||
Sbjct 7671 GACATTGTCGATGGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTGCCGGT 7618
>seq404
Length=24851
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/189 (72%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 133473 TTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGTAAAT 133531
||||| || ||||| ||| || ||| | | | ||||| ||||||||||| ||| | ||
Sbjct 18461 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCTAGCTGCTTGCCAGCGAAGAT 18403
Query 133532 GAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCTGCTC 133591
|| ||||| || || || || ||||| ||||| || |||||| ||||| | ||
Sbjct 18402 CAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGTC 18343
Query 133592 AACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTACGAA 133651
| ||||| | || ||| || || | ||||| || || || || || || || |||||
Sbjct 18342 GATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGACGAA 18283
Query 133652 AATCTGCAT 133660
|||||||||
Sbjct 18282 AATCTGCAT 18274
>seq133
Length=77988
Score = 95.1 bits (104), Expect = 1e-14
Identities = 109/147 (74%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| ||||||||||| ||| | || || ||||| ||||| || || ||||| ||||||
Sbjct 32219 TCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTG 32278
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | || | |||||| | || ||| || || | ||| | |
Sbjct 32279 TCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCCAGGGTAATG 32338
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAA 133652
|| || || ||||| || || ||||||
Sbjct 32339 GTCTTACCCGTCAGGGTCTTGACGAAA 32365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483415488413960
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