Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq249 129 4e-25 >seq249 Length=46353 Score = 129 bits (142), Expect = 4e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | |||| ||| |||||| ||| ||||| |||||||| ||||| Sbjct 8342 ACCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCGGA 8283 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || |||| || || ||||||||||||| ||||||||||||| | || Sbjct 8282 GAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGAGG 8223 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| || ||| | || |||| ||| | || ||| ||||| | Sbjct 8222 GATACCCTCCTTGTCTTGGATCTTC-GATTTGACATTGTCAATAGTATCGGAGGATTCGA 8164 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| ||||| || || | || || ||||| || |||||| Sbjct 8163 CTTCTAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACAAAAATTTGCATA 8114 Score = 109 bits (120), Expect = 4e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || | || ||| | |||| |||||| || ||| ||||| |||||||| || ||| Sbjct 8569 CCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAG 8510 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || ||||| || || ||||||||||||| ||||||||||||| | || Sbjct 8509 AGAGTACGACCATCCTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGGGGA 8450 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || || || || ||| | || |||| ||| | || || || || || Sbjct 8449 ATACCCTCCTTATCTTGGATCTTC-GATTTGACATTGTCAATAGTATCAGAAGACTCAAC 8391 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| ||||| || || | || || || ||||| |||||| Sbjct 8390 CTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCATA 8342 Score = 105 bits (116), Expect = 4e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | |||| ||| |||||| ||| ||||| |||||||| || || Sbjct 8114 ACCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGA 8055 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || |||| || || ||||||||||||| |||||||||||| | || Sbjct 8054 GAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGG 7995 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| || ||| | || |||| ||| | || ||| ||||| | Sbjct 7994 GATACCCTCCTTGTCTTGGATCTTC-GATTTGACATTGTCAATAGTATCGGAGGATTCGA 7936 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 | || | ||||| || || || || | ||||| || Sbjct 7935 CTTCTAGGGTGATGGTCTTTCCGGTAAGGGTTTTGAC 7899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328700478655680