Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq249 104 2e-17 >seq249 Length=46353 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||||||||||||||| |||| | ||| || | || ||||||||||| || ||||| Sbjct 8306 CTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAA 8247 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| || | ||| | | ||||||||| |||||| || | | | Sbjct 8246 AATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGGATCTTCGATTTGACATT 8187 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||| ||||| || || | ||||| ||||| || || | ||| || || Sbjct 8186 GTCAATAGTATCGGAGGATTCGACTTCTAGGGTGATGGTTTTGCCAGTGAGAGTCTTGAC 8127 Query 35725 AAATATCTGCAT 35736 ||| || ||||| Sbjct 8126 AAAAATTTGCAT 8115 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| || | | ||| || | || ||||||||||| || ||||| Sbjct 8078 CTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAA 8019 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTT 35652 |||| |||||||| |||| ||| | | ||||||||| |||||| Sbjct 8018 AATCAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGGATCTT 7971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450788646905320