Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq249 143 3e-29 seq76 95.1 1e-14 seq404 93.3 4e-14 seq133 89.7 5e-13 >seq249 Length=46353 Score = 143 bits (158), Expect = 3e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || ||||| ||||||||||||||||||||| | ||| | || || Sbjct 8323 ACCAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCC 8264 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| |||||||||| |||||||||||| || || || || || || ||||| Sbjct 8263 AGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGG 8204 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || |||||| ||| | || ||||| ||||| || || || || |||||||| Sbjct 8203 ATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGACTTCTAGGGTGATGGTTTTG 8144 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | ||| || || ||||||||||| Sbjct 8143 CCAGTGAGAGTCTTGACAAAAATTTGCAT 8115 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || |||| || || ||||| || || |||||||| ||||||||||| Sbjct 8569 CCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAG 8510 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || || | ||| ||||| |||||||||| |||||||||||| || || Sbjct 8509 AGAGTACGACCATCCTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGGGGA 8450 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || |||||| ||| | || || || || || || Sbjct 8449 ATACCCTCCTTATCTTGGATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAACC 8390 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || |||||||| || || | ||| || ||||| |||||||| Sbjct 8389 TCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 8343 Score = 120 bits (132), Expect = 3e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || || || || ||||| |||||||| ||||||||||| | ||| | || || Sbjct 8095 ACCAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGGCCATCCTCC 8036 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| |||||||||| |||||||||||| || || || || || || ||||| Sbjct 8035 AGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGG 7976 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || |||||| ||| | || ||||| ||||| || || || || ||||| || Sbjct 7975 ATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGACTTCTAGGGTGATGGTCTTT 7916 Query 134685 CCGGTTAAAGTTTTAACGA 134703 ||||| | ||||| |||| Sbjct 7915 CCGGTAAGGGTTTTGACGA 7897 Score = 107 bits (118), Expect = 2e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| || |||||||||||| | |||| || ||| || Sbjct 7802 ACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCA 7743 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || || || || ||||| | ||||||||| || || || || || || || || ||| Sbjct 7742 AGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGA 7683 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||||| ||| | |||||||| || || || || ||||| ||||| || Sbjct 7682 ATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCTTG 7623 Query 134685 CCGGTTA 134691 ||||||| Sbjct 7622 CCGGTTA 7616 >seq76 Length=103561 Score = 95.1 bits (104), Expect = 1e-14 Identities = 831/1327 (63%), Gaps = 31/1327 (2%) Strand=Plus/Plus Query 7654 TTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGC-GCCTCAATTGTCCTC 7712 || || ||||| || || || |||| ||| ||||| ||| | | || | || || Sbjct 2228 TTCACACACGCCTCACCTACGCTGTTCAACGCTGGCACGC-CGCAGGCCCAGCTATCGTC 2286 Query 7713 GTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA 7772 || || ||| | |||| || |||||||| || || || ||| | |||||| Sbjct 2287 ATGCTTCTTGGTCGACATGAAGGATGACAGCATTGAGGGTATCTACGATACGCTGAAGAC 2346 Query 7773 TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGC 7832 ||| || | || ||||| | ||| || || || |||||||| || | ||||| Sbjct 2347 TTGTGCTATGATCTCCAAGATGGCCGGTGGTATTGGCCTGAACGTCCACCGTATCCGCGC 2406 Query 7833 CAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCG 7892 || ||| ||| | ||| ||||| | | | ||| | | ||||||| |||| Sbjct 2407 CACCGGCTCGTACATTGCTGGCACTAACGGCACGTCAAACGGCATCGTGCCCATGCTGCG 2466 Query 7893 CGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAA---GCGCAAAGGCGCCGC 7949 ||| ||||| ||| | | || |||| |||||||| || || |||| || ||| Sbjct 2467 CGTCTTCAACAACACCGCCCGCTATGTTGACCAGGGTGGCAACAAGCGCCCTGGAGCCTT 2526 Query 7950 TGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGCAA 8009 ||| ||||| | ||||||||||| || || | | || | || | || || || Sbjct 2527 TGCTATCTACCTAGAGCCGTGGCATGCCGATGTCTTCGAGTTCCTCGACCTACGCAAGAA 2586 Query 8010 CATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCT 8069 | || || || | || ||||| || ||| | | ||||| | ||||| || Sbjct 2587 CCACGGCAAGGAGGAGATTCGTGCCCGCGACCTGTTCCTAGCCCTGTGGATTCCCGACCT 2646 Query 8070 GTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGCCC 8129 ||| |||| ||| || | |||| | ||| | |||||||||||| | ||||| Sbjct 2647 GTTCATGAAGCGTGTCGAGAAGAACGCCAACTGGACACTCATGTGCCCCAACGAGTGCCC 2706 Query 8130 TTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAACAATACGAACACGA 8189 | || |||||| | || || ||||| || | ||||| ||| Sbjct 2707 CGGTCTGGCCGACTGCTACGGTGACGAGTTCGAGGCTCTGTACGAAAAGTACGAGAGCGA 2766 Query 8190 CGGC-GCGTACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGCGCCATTATCGAATGTC 8248 ||| ||| || | | | || || | | || |||||| |||| | Sbjct 2767 GGGCCGCGGCCGCCTCACCA-TCAAGGCCCAGAAGCTATGGTACGCCATCCTCGAGGCCC 2825 Query 8249 AAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATC 8308 ||| ||| ||||| | |||| |||||||||||| || || |||||| || ||||| | Sbjct 2826 AAACCGAGACCGGAAACCCGTTCATGCTGTACAAGGATGCCTGCAACAGGAAGAGCAACC 2885 Query 8309 AAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCG 8368 | | ||| ||||||| || | || ||| |||||| | || || | ||||| ||| Sbjct 2886 AGAAGAACCTGGGCACTATCCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGCG 2945 Query 8369 CGCCCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTTCGTTGATC 8428 | || || || || || || |||||||| || ||| || || |||| || ||| Sbjct 2946 CCCCTGATGAGGTCGCTGTGTGCAATCTGGCCTCGCTGGCCCTACCGTCGTTTGTCGAT- 3004 Query 8429 GACGCTCAA--ACACTTACGACTTTGAACAATTGAAAAACGCCGTGCAAGTGACG--GTA 8484 || ||| | || ||||| | | || | | | |||| | || || Sbjct 3005 TAC-AACAAGGGCGAGTATGACTTCCAGAAGCTGCACGA-GATCACCAAG-GTCGTCGTG 3061 Query 8485 CGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCGCGTATC- 8543 ||||| | | |||||||| || ||||||| ||||||| || || || | || | Sbjct 3062 CGCAACCTGAACCGCATCATCGACGTCAATTATTATCCCGTGCCCGA--GGCTCATAACA 3119 Query 8544 -GAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCA 8602 || ||||||||| | || |||| || || || || ||||| ||||| || || | | Sbjct 3120 GCAATATGCGCCACCGCCCTATTGGAGTTGGTGTTCAGGGTCTAGCCGATGC-CTTCCTA 3178 Query 8603 TGT-TGCGCCTCCCCTACGA--AAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGG 8659 | | ||| | |||| ||| ||| || || |||| ||| || | | || | Sbjct 3179 GCTCTACGCATGCCCTTCGAGTCTGCC--GAGGCCCGCACGCTGAATAAGCAGATTTTCG 3236 Query 8660 AAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGC-CCGA--GAATTGGGCA 8716 | || | || ||| ||| || ||| || | |||| | || ||| |||| Sbjct 3237 AGACCATCTACCACGCCGCCCTAACTGCCTCGTGCGAGATTGCTCAGACCGAA---GGCA 3293 Query 8717 CGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGA 8776 | ||| | || | |||| |||| | || || |||| | ||||||||||| Sbjct 3294 CCTACTCGACCTATGAGGGCTCTCCTGTTTCGCAAGGCATTCTGCAGTTCGACATGTGGA 3353 Query 8777 ATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCG 8836 ||||||| |||| | ||||| | ||| | | ||| | || || || Sbjct 3354 ATGTCACCCCCAGCGACCTGTGGGACTGGGCCTCGCTCAAAGAACAGATCAAGCAGCACG 3413 Query 8837 GTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGG 8896 || |||| || |||||| | | || |||||| || || |||| ||||||| ||| Sbjct 3414 GTGTGCGAAACTCGCTGCTCCTAGCCCCCATGCCAACTGCTTCGACCTCTCAAATCCTGG 3473 Query 8897 GAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCG 8956 | |||||||||| ||| ||||| | ||| |||| | ||| | || |||||||| | Sbjct 3474 GCAACAACGAATGCTTCGAGCCCTACACTTCCAACATCTACCAACGTCGTGTGTTGGCTG 3533 Query 8957 GCGATTT 8963 |||| || Sbjct 3534 GCGAGTT 3540 >seq404 Length=24851 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || |||||||||||| | |||| | || || ||||| ||||| || || | Sbjct 18463 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGA 18404 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 ||| ||||| ||||| || || ||||| || || || || || || ||||| || Sbjct 18403 TCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGT 18344 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | ||||| || || || || || || || || || ||||| || | || || |||| Sbjct 18343 CGATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGACGA 18284 Query 134704 AAATTTGCATTTTG 134717 |||| ||||| ||| Sbjct 18283 AAATCTGCATCTTG 18270 >seq133 Length=77988 Score = 89.7 bits (98), Expect = 5e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 134524 CCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAA 134582 ||||||| ||||||||||| | ||| ||| | || || ||||| ||||| || || Sbjct 32184 CCTTTTGGATGTTGTAGTCAGACAA-AGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAG 32242 Query 134583 ATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCG 134642 |||| ||||| || || || || ||||| || || ||||| || || ||||| | Sbjct 32243 ATCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTG 32302 Query 134643 TCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACG 134702 || | ||||| || || || || || || |||||||| ||||| || | || || ||| Sbjct 32303 TCGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 32362 Query 134703 AAA 134705 ||| Sbjct 32363 AAA 32365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505392846935080