Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq53 181 1e-40
seq76 114 2e-20
>seq53
Length=118516
Score = 181 bits (200), Expect = 1e-40
Identities = 556/855 (65%), Gaps = 20/855 (2%)
Strand=Plus/Plus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|| ||||| |||||||| |||||||||||||| || || ||||| ||| || || ||
Sbjct 89753 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 89812
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
|||||||| || || || || || ||| || || | || | | |
Sbjct 89813 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGTTGCCAAGGGCCACTAAG 89872
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
| | || ||||| || || || || ||||||| ||| ||||| || ||||
Sbjct 89873 AGACGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCC---GAGT 89929
Query 39506 TTAACT---GGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562
| | || |||||||| || || ||||| || || ||| | ||||| || || ||
Sbjct 89930 AAACCGCAAGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATG 89989
Query 39563 ATCGATGTT--ACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGG 39620
|| || | || | || | | || | | | || |||| | |||||
Sbjct 89990 ATT--TGCTCGACAAGTTCCTTGCCAGGGCGGTTGTTCAGGTGGGAGAACAACAGGCAGG 90047
Query 39621 CGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAG 39680
| |||||| || || |||||||| | | ||| | ||||||||||| || || || |
Sbjct 90048 CAAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGGCCGG 90107
Query 39681 GCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGC 39740
|||| ||||||||||| |||||||| |||| ||||| | |||||||||||||||||
Sbjct 90108 GCATCAGACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCAGAAAAGAAGATGC 90167
Query 39741 CTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT-----AT 39795
|||| || || ||||| || | || | || | || ||| || | ||| ||
Sbjct 90168 CTTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTC--TCTGTCGCAGAT 90225
Query 39796 CCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 39855
|||||| | ||||| || ||||| || || || || || || ||||| || ||
Sbjct 90226 CCACTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAA 90285
Query 39856 GAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTC 39915
|| || | || || |||| || ||||| || |||| | || | ||
Sbjct 90286 CAGGTACGTGCGCTGGGCAGGCTCCTTAATGTAAGTATCGATCAACAAAGAGTAGGTCTC 90345
Query 39916 TGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTG 39975
|| |||||||| || ||| ||||| || || || || || | || |||| || ||
Sbjct 90346 GGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTG 90405
Query 39976 TACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAA 40035
||||| | | || | || ||| || || || ||||| |||||| || |||||
Sbjct 90406 GACCTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACTATGCCATCAGAGGCAGCAAA 90465
Query 40036 AAATGCCAATACATGTTTAATAAAATATTTTTCATC---GGGTGTCAATTTATTCCAGTC 40092
|| |||| | || || || || | || || || | || ||||||||
Sbjct 90466 GAAGGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAGTC 90525
Query 40093 ATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTT 40152
| || |||||| |||| ||| | || ||||| ||||| ||||| ||||| ||||| ||
Sbjct 90526 GTGGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTT 90585
Query 40153 GTACATGTTCCATAT 40167
|||||| | ||| ||
Sbjct 90586 GTACATCTGCCAGAT 90600
>seq76
Length=103561
Score = 114 bits (126), Expect = 2e-20
Identities = 242/361 (67%), Gaps = 0/361 (0%)
Strand=Plus/Minus
Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654
|| || ||||| || || ||||||||||| || |||| || || || | || | | |
Sbjct 2661 ACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATC 2602
Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714
|| || || || || || || ||||| ||||| | | ||| | |||||| ||
Sbjct 2601 TCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGC 2542
Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774
||||| || || || | | |||| || || || || || ||||| || | || | |||
Sbjct 2541 TCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCG 2482
Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834
||||| || |||| | |||||| || | || || || || | || || || |||| |
Sbjct 2481 GTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTGACGTGCCGTTAGTGCCAGCA 2422
Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894
|| || || | ||||| ||| | || || || || || ||||| ||
Sbjct 2421 ATGTACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCCAATACCACCGGCCATCTTG 2362
Query 69895 GAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATG 69954
||||| | ||||||| |||| || || || |||||||| ||||| ||||| |||||
Sbjct 2361 GAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCAATGCTGTCATCCTTCATG 2302
Query 69955 T 69955
|
Sbjct 2301 T 2301
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686901252589560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |