Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq53 116 1e-20 >seq53 Length=118516 Score = 116 bits (128), Expect = 1e-20 Identities = 362/547 (66%), Gaps = 25/547 (5%) Strand=Plus/Minus Query 443330 GGCCCAGTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGA 443389 |||| ||| ||||| |||||||||||||| ||||| || | ||| |||||| | Sbjct 90574 GGCCTCGTTCTGGACTGCTGAGGAGATTGATCTATCCAAAGATCTCCACGACTGGAACAA 90515 Query 443390 ACGACTATCTAGCCATGAACGCG-ATTTCTTCAAATG---CATCTTGGCCTTCTTTGCAC 443445 || || || ||| | ||| | | | ||||| | ||| ||||||||||||| Sbjct 90514 CCGGCT---TA-CCAAGGACGAGCAGTACTTCATCTCTCACATTCTGGCCTTCTTTGCTG 90459 Query 443446 CGAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACA 443505 | || || || ||| ||||| ||||| |||||||| | ||| | | Sbjct 90458 CCTCTGATGGCATAGTCAACGAGAACCTGGTTGAGCGTTTCTCTGGCGAGGTCCAGATCC 90399 Query 443506 CCGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCT 443565 | ||||| || | |||||| | ||||| | ||||||||||| ||| ||||| || Sbjct 90398 CTGAGGCTCGTTGCTTCTATGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCT 90339 Query 443566 ACAGTCAGTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCA 443624 || | ||||||| | || ||| || || | ||||| | | || ||| Sbjct 90338 ACTCTTTGTTGATCGATACTTACATT---AAGGAGCCTGCCCAGCGCACGTACCTGTTCA 90282 Query 443625 TCGTTCATGAC--CACGCCAGGCAT-CACTGAAAAGACTCGCTGGGCAAAACAGTGGCTC 443681 || | |||| || || |||| | | | |||| | |||||| ||||| || Sbjct 90281 ACGCTATTGACACCATTCCCTGCATACGCCGCAAAGCCGA-CTGGGCTCTCAAGTGGATC 90223 Query 443682 ---GAACGAGAAAATCTCAGCTTCGTCG-AGCGACTAGTCGCTTTTGCTGTGGTCGAAGG 443737 || ||||| ||| ||| | |||| ||| |||||||||||| |||||||| Sbjct 90222 TGCGACAGAGAA----TCAACTTTTGCTCAGCGCCTAATCGCTTTTGCTGCTGTCGAAGG 90167 Query 443738 ACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGC 443797 | || ||| || ||| || ||||||||||| ||| || |||||||| || |||| Sbjct 90166 CATCTTCTTTTCTGG-AGCCTTTGCCTCCATCTTTTGGCTGCGCAAGCGTGGTCTGATGC 90108 Query 443798 ACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCG 443857 ||| ||||||||| |||||| ||||| ||| || |||||| |||| ||||| | Sbjct 90107 CCGGCCTGACCTTTTCTAACGAGCTGATTTCTCGTGATGAGGGTCTGCACACTGACTTTG 90048 Query 443858 CCTGTCT 443864 |||| || Sbjct 90047 CCTGCCT 90041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588318111862155