Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq53 116 1e-20
>seq53
Length=118516
Score = 116 bits (128), Expect = 1e-20
Identities = 362/547 (66%), Gaps = 25/547 (5%)
Strand=Plus/Minus
Query 443330 GGCCCAGTTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGA 443389
|||| ||| ||||| |||||||||||||| ||||| || | ||| |||||| |
Sbjct 90574 GGCCTCGTTCTGGACTGCTGAGGAGATTGATCTATCCAAAGATCTCCACGACTGGAACAA 90515
Query 443390 ACGACTATCTAGCCATGAACGCG-ATTTCTTCAAATG---CATCTTGGCCTTCTTTGCAC 443445
|| || || ||| | ||| | | | ||||| | ||| |||||||||||||
Sbjct 90514 CCGGCT---TA-CCAAGGACGAGCAGTACTTCATCTCTCACATTCTGGCCTTCTTTGCTG 90459
Query 443446 CGAGCGACGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACA 443505
| || || || ||| ||||| ||||| |||||||| | ||| | |
Sbjct 90458 CCTCTGATGGCATAGTCAACGAGAACCTGGTTGAGCGTTTCTCTGGCGAGGTCCAGATCC 90399
Query 443506 CCGAGGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCT 443565
| ||||| || | |||||| | ||||| | ||||||||||| ||| ||||| ||
Sbjct 90398 CTGAGGCTCGTTGCTTCTATGGTTTCCAGATCATGATGGAGAACATCCACTCCGAGACCT 90339
Query 443566 ACAGTCAGTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCC-ATCTTCTCA 443624
|| | ||||||| | || ||| || || | ||||| | | || |||
Sbjct 90338 ACTCTTTGTTGATCGATACTTACATT---AAGGAGCCTGCCCAGCGCACGTACCTGTTCA 90282
Query 443625 TCGTTCATGAC--CACGCCAGGCAT-CACTGAAAAGACTCGCTGGGCAAAACAGTGGCTC 443681
|| | |||| || || |||| | | | |||| | |||||| ||||| ||
Sbjct 90281 ACGCTATTGACACCATTCCCTGCATACGCCGCAAAGCCGA-CTGGGCTCTCAAGTGGATC 90223
Query 443682 ---GAACGAGAAAATCTCAGCTTCGTCG-AGCGACTAGTCGCTTTTGCTGTGGTCGAAGG 443737
|| ||||| ||| ||| | |||| ||| |||||||||||| ||||||||
Sbjct 90222 TGCGACAGAGAA----TCAACTTTTGCTCAGCGCCTAATCGCTTTTGCTGCTGTCGAAGG 90167
Query 443738 ACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGC 443797
| || ||| || ||| || ||||||||||| ||| || |||||||| || ||||
Sbjct 90166 CATCTTCTTTTCTGG-AGCCTTTGCCTCCATCTTTTGGCTGCGCAAGCGTGGTCTGATGC 90108
Query 443798 ACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCG 443857
||| ||||||||| |||||| ||||| ||| || |||||| |||| ||||| |
Sbjct 90107 CCGGCCTGACCTTTTCTAACGAGCTGATTTCTCGTGATGAGGGTCTGCACACTGACTTTG 90048
Query 443858 CCTGTCT 443864
|||| ||
Sbjct 90047 CCTGCCT 90041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588318111862155
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |