Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq76 257 2e-63
seq298 89.7 6e-13
>seq76
Length=103561
Score = 257 bits (284), Expect = 2e-63
Identities = 909/1401 (65%), Gaps = 43/1401 (3%)
Strand=Plus/Minus
Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765
|||||||||| | ||||| || || |||||||| || || |||| |||||| | ||| |
Sbjct 3515 GGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCG 3456
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
| || |||||||| || || | | || ||| || | ||| | || |||||| |||
Sbjct 3455 AAGCAGTTGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTT 3396
Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884
| ||||| ||||||| | | ||| || | || |||| ||||||| |||||
Sbjct 3395 CTTTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTGACATTCC-ACATGTCGAACTGC 3337
Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944
|| | ||||| || | ||||| |||||| |||| |||| |||| || | |||
Sbjct 3336 AGAATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCA 3277
Query 110945 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 111004
| || || || |||| ||||| || ||||| || || || | ||||| |
Sbjct 3276 ATCTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGC 3217
Query 111005 TCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGA 111059
||| || | || || || ||||||| | | || |||| || |
Sbjct 3216 GTGCGGGCCTCGGCAGACTCGAAGGGCATGCGTAGAGCTAGGAAGG-----CATCGGCTA 3162
Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 111118
|||| |||||||| | |||||||| | ||| |||||||| || | || |||
Sbjct 3161 GACCCTGAACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC---CTCGG 3105
Query 111119 --ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176
||||||||| |||| ||| |||| ||||| || || || | ||| ||||
Sbjct 3104 GCACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGA 3045
Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236
| || || || || | | ||| | || | | | || |||| || || ||||
Sbjct 3044 TCTCGTGCAGCTTCTGGAAGTCATACTCGCCCTTGTTGTAATCGACAAACGACGGTAGGG 2985
Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296
| | || |||| |||||| ||||| |||||| | |||||| | || || |
Sbjct 2984 CCAGCGAGGCCAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGG 2925
Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356
| || | |||||| || || || |||| ||||| ||||| |||||| ||||||| |
Sbjct 2924 TGCACAGGTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGG 2865
Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416
|||||||||| |||||| | || | || ||||| || || | | ||| || || | ||
Sbjct 2864 CATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACC 2805
Query 111417 A-AACATCGGCGGCTGGTACAATG--GCGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTG 111472
| | | || | | || | ||| | | |||| || ||||| |||||||||| |
Sbjct 2804 ATAGCTTCTGGGCCTTG----ATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCG 2749
Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532
|| || || || ||||| ||||| ||||| ||||| || || || || ||
Sbjct 2748 TACAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCAC 2689
Query 111533 AAAAGAGACCA-TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591
| || | ||| ||| | ||| ||| || ||||||||||| ||||| |||||||||||
Sbjct 2688 ATGAGTGTCCAGTTGGCGTTCTT-CTCGACACGCTTCATGAACAGGTCGGGAATCCACAG 2630
Query 111592 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 111651
|| | || || || | ||| ||| || | || ||||| |||| || ||
Sbjct 2629 GGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAG 2570
Query 111652 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTC 111707
|||||| | || ||| || ||||| ||||| || |||| || | | ||| | |
Sbjct 2569 GAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTT 2510
Query 111708 GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 111767
| | ||| | || | |||||||| || ||| ||| || ||||| ||||| || | |
Sbjct 2509 GTTG-CCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGA 2451
Query 111768 TACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCATG 111825
| || | ||| || || || || || |||||| |||| | | | ||
Sbjct 2450 TGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAG--CCGGTGGCGCGGATACGGTG 2393
Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885
|| || || |||||||| || ||| ||| ||||| ||||| | | || || |
Sbjct 2392 GACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATC 2333
Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945
|||||||| | || ||| ||||| || ||| | |||||| || | ||| ||
Sbjct 2332 GTAGATACCCTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GG 2274
Query 111946 TCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT--GGGA 112002
|| || || ||||| ||||| || || |||| ||||| ||| | | ||| |||
Sbjct 2273 CCTGCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGA--AAAGCTTACTGGA 2216
Query 112003 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGAC 112062
||| | || ||| ||||| | ||| || | || || ||| |||| || ||
Sbjct 2215 CATGTAGTTGTACGTCTCGAGCACACGGTCGACACGGTCGCCCCAGATACCGACGGCAAC 2156
Query 112063 CCGCATGAACATGTACTGTGG 112083
||||||| ||||| ||| ||
Sbjct 2155 ACGCATGATCATGTGCTGCGG 2135
>seq298
Length=37418
Score = 89.7 bits (98), Expect = 6e-13
Identities = 208/310 (67%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689
|| || || || || ||||| ||||| || ||| |||| |||||| | |||| |||
Sbjct 33103 GCGTCGATTTCGTCGATGAAAACAATGCACGGTGAGTTTTTGCGGGCTGTCGCAAACAGA 33044
Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCG--GCAGAGC 11747
||||| || | | || ||||| |||||||| |||||||| | | | || || |
Sbjct 33043 TCGCGTACACGCGAAGGGCCGACACCGACAAACATTTCCACAAACTCGGAGCCGCTGA-C 32985
Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807
|||| | ||| || || || || || || | || || || || ||||| || |
Sbjct 32984 ACTGAA-GAAAGGTACGCCAGACTCGCCGGCAGTCGCCTTAGCCAGAAGTGTCTTACCGG 32926
Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCAAAATATC 11867
| || || ||| | || | ||| || ||||| |||||||||||| | ||| |
Sbjct 32925 TGCCAGGAGGACCGGACAGGATGGCACCGCGGGGAATCTTGGCACCAAGACGCAAAAACT 32866
Query 11868 TCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATCC 11927
|||| || | ||||||||| | ||||| ||| | || |||| ||| | || || |
Sbjct 32865 TCTCAGGCTTCTTGAGAAACTGCACAAACTCCATGATCTCCACTTTAGCCTCATCCATAC 32806
Query 11928 CCTCAACATC 11937
| |||||||
Sbjct 32805 CGGCAACATC 32796
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628025099498400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |