Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq76 257 2e-63 seq298 89.7 6e-13 >seq76 Length=103561 Score = 257 bits (284), Expect = 2e-63 Identities = 909/1401 (65%), Gaps = 43/1401 (3%) Strand=Plus/Minus Query 110706 GGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGG 110765 |||||||||| | ||||| || || |||||||| || || |||| |||||| | ||| | Sbjct 3515 GGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCG 3456 Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825 | || |||||||| || || | | || ||| || | ||| | || |||||| ||| Sbjct 3455 AAGCAGTTGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTT 3396 Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884 | ||||| ||||||| | | ||| || | || |||| ||||||| ||||| Sbjct 3395 CTTTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTGACATTCC-ACATGTCGAACTGC 3337 Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944 || | ||||| || | ||||| |||||| |||| |||| |||| || | ||| Sbjct 3336 AGAATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCA 3277 Query 110945 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 111004 | || || || |||| ||||| || ||||| || || || | ||||| | Sbjct 3276 ATCTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGC 3217 Query 111005 TCCTTGGCTTCATCTGAATCAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGA 111059 ||| || | || || || ||||||| | | || |||| || | Sbjct 3216 GTGCGGGCCTCGGCAGACTCGAAGGGCATGCGTAGAGCTAGGAAGG-----CATCGGCTA 3162 Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 111118 |||| |||||||| | |||||||| | ||| |||||||| || | || ||| Sbjct 3161 GACCCTGAACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC---CTCGG 3105 Query 111119 --ACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGA 111176 ||||||||| |||| ||| |||| ||||| || || || | ||| |||| Sbjct 3104 GCACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGA 3045 Query 111177 TTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGG 111236 | || || || || | | ||| | || | | | || |||| || || |||| Sbjct 3044 TCTCGTGCAGCTTCTGGAAGTCATACTCGCCCTTGTTGTAATCGACAAACGACGGTAGGG 2985 Query 111237 CGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTG 111296 | | || |||| |||||| ||||| |||||| | |||||| | || || | Sbjct 2984 CCAGCGAGGCCAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGG 2925 Query 111297 TACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACG 111356 | || | |||||| || || || |||| ||||| ||||| |||||| ||||||| | Sbjct 2924 TGCACAGGTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGG 2865 Query 111357 CATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCC 111416 |||||||||| |||||| | || | || ||||| || || | | ||| || || | || Sbjct 2864 CATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACC 2805 Query 111417 A-AACATCGGCGGCTGGTACAATG--GCGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTG 111472 | | | || | | || | ||| | | |||| || ||||| |||||||||| | Sbjct 2804 ATAGCTTCTGGGCCTTG----ATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCG 2749 Query 111473 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 111532 || || || || ||||| ||||| ||||| ||||| || || || || || Sbjct 2748 TACAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCAC 2689 Query 111533 AAAAGAGACCA-TTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG 111591 | || | ||| ||| | ||| ||| || ||||||||||| ||||| ||||||||||| Sbjct 2688 ATGAGTGTCCAGTTGGCGTTCTT-CTCGACACGCTTCATGAACAGGTCGGGAATCCACAG 2630 Query 111592 GGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 111651 || | || || || | ||| ||| || | || ||||| |||| || || Sbjct 2629 GGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAG 2570 Query 111652 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTC 111707 |||||| | || ||| || ||||| ||||| || |||| || | | ||| | | Sbjct 2569 GAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTT 2510 Query 111708 GACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAA 111767 | | ||| | || | |||||||| || ||| ||| || ||||| ||||| || | | Sbjct 2509 GTTG-CCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGA 2451 Query 111768 TACCATCTGATTGACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCACATCATG 111825 | || | ||| || || || || || |||||| |||| | | | || Sbjct 2450 TGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAG--CCGGTGGCGCGGATACGGTG 2393 Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885 || || || |||||||| || ||| ||| ||||| ||||| | | || || | Sbjct 2392 GACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATC 2333 Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945 |||||||| | || ||| ||||| || ||| | |||||| || | ||| || Sbjct 2332 GTAGATACCCTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GG 2274 Query 111946 TCT-TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT--GGGA 112002 || || || ||||| ||||| || || |||| ||||| ||| | | ||| ||| Sbjct 2273 CCTGCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGA--AAAGCTTACTGGA 2216 Query 112003 CATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGAC 112062 ||| | || ||| ||||| | ||| || | || || ||| |||| || || Sbjct 2215 CATGTAGTTGTACGTCTCGAGCACACGGTCGACACGGTCGCCCCAGATACCGACGGCAAC 2156 Query 112063 CCGCATGAACATGTACTGTGG 112083 ||||||| ||||| ||| || Sbjct 2155 ACGCATGATCATGTGCTGCGG 2135 >seq298 Length=37418 Score = 89.7 bits (98), Expect = 6e-13 Identities = 208/310 (67%), Gaps = 4/310 (1%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 || || || || || ||||| ||||| || ||| |||| |||||| | |||| ||| Sbjct 33103 GCGTCGATTTCGTCGATGAAAACAATGCACGGTGAGTTTTTGCGGGCTGTCGCAAACAGA 33044 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCG--GCAGAGC 11747 ||||| || | | || ||||| |||||||| |||||||| | | | || || | Sbjct 33043 TCGCGTACACGCGAAGGGCCGACACCGACAAACATTTCCACAAACTCGGAGCCGCTGA-C 32985 Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807 |||| | ||| || || || || || || | || || || || ||||| || | Sbjct 32984 ACTGAA-GAAAGGTACGCCAGACTCGCCGGCAGTCGCCTTAGCCAGAAGTGTCTTACCGG 32926 Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCAAAATATC 11867 | || || ||| | || | ||| || ||||| |||||||||||| | ||| | Sbjct 32925 TGCCAGGAGGACCGGACAGGATGGCACCGCGGGGAATCTTGGCACCAAGACGCAAAAACT 32866 Query 11868 TCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATCC 11927 |||| || | ||||||||| | ||||| ||| | || |||| ||| | || || | Sbjct 32865 TCTCAGGCTTCTTGAGAAACTGCACAAACTCCATGATCTCCACTTTAGCCTCATCCATAC 32806 Query 11928 CCTCAACATC 11937 | ||||||| Sbjct 32805 CGGCAACATC 32796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628025099498400