Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq76 223 4e-53
>seq76
Length=103561
Score = 223 bits (246), Expect = 4e-53
Identities = 855/1329 (64%), Gaps = 29/1329 (2%)
Strand=Plus/Minus
Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241
||||| |||| ||||| ||||| ||||| || ||||| |||| |||||| | || ||
Sbjct 3513 TAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGAGAGGTCGAA 3454
Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301
|| || |||||||| || | ||| || ||| || | ||| | | | | || ||||
Sbjct 3453 GCAGTTGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCGTGCTGCTTGATCTGTTCT 3394
Query 118302 TTGAGAGCGTCCCAGTCGTAGTTGA-GCTTTGTCTCCCCCTGCCACATATCAAACTGGAG 118360
||||| | | ||||||| | | ||| | | | | |||||| || ||||| ||
Sbjct 3393 TTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTGACATT-CCACATGTCGAACTGCAG 3335
Query 118361 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 118420
|| ||||| || | || || |||||| | ||| || | ||| || || || |
Sbjct 3334 AATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCCTTCGGTCTGAGCAAT 3275
Query 118421 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGC 118480
||| | || ||||| ||||| || || || || ||||| | ||||| |
Sbjct 3274 CTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAATCTGCTTATTCAGCGT 3215
Query 118481 CTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTG 118540
||||||| | || || || | | || | || |||| || ||||| ||
Sbjct 3214 GCGGGCCTCGGCAGACTCGAAGGGCATGCGTAGAGCTAGGAAGGCATCGGCTAGACCCTG 3155
Query 118541 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTC---CACGGG 118597
||||| | ||||| ||||| || | |||||| || |||| ||| ||||||
Sbjct 3154 AACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC---CTCGGGCACGGG 3098
Query 118598 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 118657
|||| |||| ||||| | | || || || ||| ||||| ||||| || ||
Sbjct 3097 ATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTTGGTGATCTCGTG 3038
Query 118658 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGA 118717
||||| | | | ||| | || | | | || |||| || || ||||| | ||
Sbjct 3037 CAGCTTCTGGAAGTCATACTCGCCCTTGTTGTAATCGACAAACGACGGTAGGGCCAGCGA 2978
Query 118718 CGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAA 118777
|||||||| ||||||| | |||||| | |||||| || || || |||||||
Sbjct 2977 GGCCAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATGATCTCGGTGCACAG 2918
Query 118778 GTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTT 118837
||| || || || ||||||| |||||| || || ||| |||| || ||||||||
Sbjct 2917 GTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTGTTGCAGGCATCCTT 2858
Query 118838 GTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CAT 118896
||| |||||| | || | || ||||| ||||||| || ||| || || | ||| | | |
Sbjct 2857 GTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATGGCGTACCATAGCTT 2798
Query 118897 CGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTT 118956
| | || | | ||| | | | || ||||| |||||||||| ||| || || |
Sbjct 2797 CTGGGCCTTG-ATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTTTCGTACAGAGCCT 2739
Query 118957 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 119016
| ||||| ||||| | || | || || || || | ||||| | ||| | ||
Sbjct 2738 CGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTCC 2679
Query 119017 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 119076
| | | || ||| || ||||||||||| ||||| || ||||| || || ||| |
Sbjct 2678 AGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAACA 2619
Query 119077 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 119136
| || || ||| || || | || || || || | || | || || | ||
Sbjct 2618 GGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAGA 2559
Query 119137 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACG------ACCAG 119190
||| || |||||||| || ||||| | || | | || | | || |||
Sbjct 2558 CATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCC---AGGGCGCTTGTTGCCAC 2502
Query 119191 CCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGG 119250
|||||| ||||| | || ||| ||| || || || ||||| || | ||| || | |
Sbjct 2501 CCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCACGATGCCGTTTG 2442
Query 119251 ATTGGCCATTTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCAT 119308
| ||| || || || || |||||| | |||| | || | ||||| || ||
Sbjct 2441 ACGTGCCGTTAGTGCCAGCAATGTACGAGCC--GGTGGCGCGGATACGGTGGACGTTCAG 2384
Query 119309 ACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCC 119368
|||||||| || ||| ||| ||||| || || | | || | ||||||| ||
Sbjct 2383 GCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACC 2324
Query 119369 ATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTG 119427
|| || |||| |||| | ||| | |||||| ||| | || |||||| || |
Sbjct 2323 CTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GGCCTGCGGCG 2265
Query 119428 TACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTT--GGGACATCTTGTC 119485
| ||||||||||| || || |||| ||||| ||| | | ||| |||||| | ||
Sbjct 2264 TGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGA--AAAGCTTACTGGACATGTAGTT 2207
Query 119486 GTAGGTCTC 119494
||| |||||
Sbjct 2206 GTACGTCTC 2198
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618428404943240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |