Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq60 178 4e-39
seq249 154 4e-32
seq309 125 2e-23
seq170 125 2e-23
seq404 107 6e-18
seq270 86.0 2e-11
>seq60
Length=113822
Score = 178 bits (196), Expect = 4e-39
Identities = 415/616 (67%), Gaps = 9/616 (1%)
Strand=Plus/Plus
Query 349282 AGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGA 349341
||||||| | | || || || || || || || || || |||||| | | |||||
Sbjct 50009 AGGTAACCGTATCACTCCTTCGTATGTCGCCTTCACTGAGGAGGAGCGTCTCGTCGGTGA 50068
Query 349342 TTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACT 349401
| || || || || || | || || || | || |||||||| |||| ||||| ||
Sbjct 50069 CGCCGCCAAGAACCAGGCCCCCGCCAACCCTATCAACACGGTTTTCGATGTCAAGCGTCT 50128
Query 349402 TATTGGTAG-AAGTTTTTCTGACAAATCTACACAATCTGATCTAAAACATTTTCCTTTTA 349460
|||||| | ||||| | || || | || ||||| | || || || |||| |
Sbjct 50129 CATTGGTCGCAAGTTCAAC-GAGAAGGAGATCCAGGCTGATATTAAGCACTTCCCTTACA 50187
Query 349461 CTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGA-ACAA 349519
||| | ||| | | | || || || | || ||||||| | || ||||| || |
Sbjct 50188 AGGTTAT--CAACA-AGGATGGCAAGCCTTTCATCAAGGTTGACTTCAAGGGTGACACCA 50244
Query 349520 AAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCT 349579
| || | | | ||||| || || || | ||| || ||| || |||||||| |||||
Sbjct 50245 AGACCTTCTCT-CCCGAGGAGATCTCTGCCATGATTCTAGGCAAGATGAAGGAGGTTGCT 50303
Query 349580 GAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAAT 349639
|| | || ||||| | || || || | ||||| ||||||| || ||||| || ||
Sbjct 50304 GAGTCTTACCTAGGTAAGACTGTCACCCACGCTGTCGTTACTGTTCCCGCCTACTTCAAC 50363
Query 349640 GATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGA 349699
|||||||||||| || || || |||||||||| |||||| || | || |||| |
Sbjct 50364 GATGCCCAGCGTCAAGCTACCAAGGATGCTGGCATCATTGCTGGTCTGAACATTCTCCGT 50423
Query 349700 ATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA 349759
|| | || || ||||||||||| || || || || || |||||||| | |||
Sbjct 50424 ATTGTCAACGAGCCCACTGCTGCCGCCATCGCCTACGGTCTTGATAAGACCGGTGCTGGT 50483
Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819
|| | || | | | ||| ||||||||||||| |||||||| || | || |
Sbjct 50484 GAGCGCCAAATCATCGTCTACGATCTAGGTGGTGGTACCTTTGATGTTTCTTTGCTGTCC 50543
Query 349820 CTTGAAGAG-GGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGA 349878
||| |||| || | ||||| ||| || ||||||||||| || || |||||||| ||
Sbjct 50544 ATTG-AGAGTGGCGTCTTTGAGGTTCTGGCTACTGCTGGTGACACTCACCTTGGTGGTGA 50602
Query 349879 AGATTTTGATAATCGT 349894
||||| ||| | |||
Sbjct 50603 GGATTTCGATCAGCGT 50618
>seq249
Length=46353
Score = 154 bits (170), Expect = 4e-32
Identities = 168/223 (75%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | ||||| ||||| ||||| ||||| ||||| || || |
Sbjct 8121 TTTGCATACCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGGATGTTGT 8062
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| ||||| | || || ||||| || || || || || ||||| || ||||| |||||||
Sbjct 8061 AGTCAGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGAT 8002
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||| || || || || || || || || | ||| ||||| ||||| | ||| || |
Sbjct 8001 CCGGAGGGATACCCTCCTTGTCTTGGATCTTCGATTTGACATTGTCAATAGTATCGGAGG 7942
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
||| ||||| || || | ||||||||||| || ||||| ||
Sbjct 7941 ATTCGACTTCTAGGGTGATGGTCTTTCCGGTAAGGGTTTTGAC 7899
Score = 154 bits (170), Expect = 4e-32
Identities = 175/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | ||||| ||||| ||||| ||||| |||||||| || |
Sbjct 8349 TTTGCATACCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGAATGTTGT 8290
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| || || | || || ||||| || || || || || ||||| || ||||| |||||||
Sbjct 8289 AGTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGAT 8230
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||| || || || || || || || || | ||| ||||| ||||| | ||| || |
Sbjct 8229 CTGGAGGGATACCCTCCTTGTCTTGGATCTTCGATTTGACATTGTCAATAGTATCGGAGG 8170
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| ||||| || || | || || || || || || || |||||||| |||||
Sbjct 8169 ATTCGACTTCTAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACAAAAATTTGCAT 8115
Score = 131 bits (144), Expect = 5e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | | || || || || ||||||||||| || || || || || ||
Sbjct 7824 CATACCACCACGCAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTC 7765
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || || |||||||| ||||| || || |||||||| ||||| || ||
Sbjct 7764 GGACAGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGG 7705
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| || || ||||||||||| || | || ||||| || || | || || | ||
Sbjct 7704 GGGAATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTC 7645
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTG 140718
|| ||||| || | ||||| ||||||| ||
Sbjct 7644 GACCTCAAGAGTGATGGTCTTGCCGGTTACTG 7613
>seq309
Length=35318
Score = 125 bits (138), Expect = 2e-23
Identities = 226/328 (69%), Gaps = 2/328 (1%)
Strand=Plus/Plus
Query 378120 ATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGT 378179
||||| ||||| || || || ||||||||| || | || | ||| | |||||
Sbjct 8879 ATCAAGACCATCCTCACCGTACAGGAATTGAACGATATCTCCTAGAGAGTTACGAACAGT 8938
Query 378180 CATATCATATCTAACCATTAA-ATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAAC 378238
|||||| || | || ||| |||||| | || || | || || || ||| || |
Sbjct 8939 TCCATCATA-CTTAGCACTAACATCTTCAAGAGCCTTGACTAGACGACGTTGAATGTATC 8997
Query 378239 CAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGA 378298
|||||| ||| || || ||||||||||| ||||| |||||||| |||| || ||||
Sbjct 8998 CAGTTTCGGCAGTCTTGACAGCAGTATCAATCAAACCTTCACGACCAGCCATGGCGTGGA 9057
Query 378299 AGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGC 378358
|||| || || | || ||||| |||| || | || | |||| ||| || | ||
Sbjct 9058 AGAAGAACTCGCTTGGCGTAAGACCACGAAGGTAAGAGTTTTCAACAAAGCCACGTGACT 9117
Query 378359 CTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAA 378418
| || |||| ||||| ||| || | ||||| | ||||| | || || ||| | ||||
Sbjct 9118 CGGGAGAATAATCATCTTTGGTGAAGTGAGGAAGCGTACGGTACTTGAATCCAAAGGGAA 9177
Query 378419 TTCGTTTTCCATCAACATTCTGTTGACC 378446
| || ||||| || || | ||||||||
Sbjct 9178 TACGCTTTCCTTCGACGATTTGTTGACC 9205
Score = 96.9 bits (106), Expect = 1e-14
Identities = 118/158 (75%), Gaps = 5/158 (3%)
Strand=Plus/Plus
Query 377439 TGATAATATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACC 377498
||| ||| || |||||| || || |||||| | ||||| ||| ||||| | |||||
Sbjct 8176 TGAGAAT-TTCCTTCAAA-CGGGGGACACCAAGAGTAACGTTC---TTAGAAGACACACC 8230
Query 377499 AGCAAAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGC 377558
|||||| |||||||| || || || | || |||| ||||| ||||| ||||| || ||
Sbjct 8231 AGCAAAATGGAAAGTGTTGAGCGTCATCTGCGTAGCAGGCTCTCCAATGGACTGAGCAGC 8290
Query 377559 AATAACGCCAACCATTTCTCCAGGATTGACAATAGCCT 377596
| ||||||||||| || || || ||| || |||||
Sbjct 8291 CAGCACGCCAACCATCTCACCGGGGCTGATAAAAGCCT 8328
>seq170
Length=65362
Score = 125 bits (138), Expect = 2e-23
Identities = 261/389 (67%), Gaps = 0/389 (0%)
Strand=Plus/Plus
Query 349493 ATTGAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATG 349552
||||||||||| | || || || || || ||| ||||| || || || || |||
Sbjct 45978 ATTGAGGTTGAGTTCAAGGGCGAGACCAAGCAGTTTACCCCCGAGGAGATCTCCTCTATG 46037
Query 349553 GTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCT 349612
||| | | || ||| || | ||||| | || | ||| || || | | |||
Sbjct 46038 GTTCTGATCAAGATGCGTGAGACCGCTGAGTCGTACCTTGGTACCACCGTTAACAACGCT 46097
Query 349613 GTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGC 349672
||||| ||||| || ||||| || || ||| | |||||| || || || || ||||
Sbjct 46098 GTTATCACTGTTCCTGCCTACTTCAACGATTCTCAGCGTCAGGCTACCAAGGACTCTGGT 46157
Query 349673 AGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCA 349732
||||| || | ||||| | | || ||||| || |||||||| || || |||||
Sbjct 46158 CTTATTGCCGGTCTGAATGTCTTGCGTATCATTAACGAGCCCACTGCCGCTGCCATTGCC 46217
Query 349733 TATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGT 349792
|| || |||||||| | | || || || | || || || ||| | ||||||
Sbjct 46218 TACGGTCTTGATAAGAAGGTCGAGGGTGAGCGCAACGTCCTGATCTTCGATCTGGGTGGT 46277
Query 349793 GGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACT 349852
|| ||||| ||||| || || | || |||| || || || || || || || | |||
Sbjct 46278 GGCACTTTCGATGTCTCGCTGTTGACCATTGAGGATGGTATCTTCGAGGTCAAGTCCACT 46337
Query 349853 GCTGGTGATACACATCTTGGTGGAGAAGA 349881
|| ||||| || ||||| ||||| |||||
Sbjct 46338 GCCGGTGACACTCATCTGGGTGGTGAAGA 46366
>seq404
Length=24851
Score = 107 bits (118), Expect = 6e-18
Identities = 153/213 (72%), Gaps = 7/213 (3%)
Strand=Plus/Minus
Query 140528 AACAAGATGAAGAGTA-GACT--CTTTTTGAATATTATAATCAGATAATGTTCGCCCATC 140584
|||||||||| || |||| | || || || || || || || | || || |||||
Sbjct 18482 AACAAGATGA----TATGACTGACCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 18427
Query 140585 TTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATC 140644
|| || || || ||||| ||||| || || || ||||| || ||||| || || |||||
Sbjct 18426 CTCTAGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATC 18367
Query 140645 CTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGT 140704
||| || |||| || ||||| || || | || || | ||||| ||||| || | ||
Sbjct 18366 CTGGATCTTAGACTTGACATTGTCGATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGT 18307
Query 140705 CTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||| || || || || || || |||||||||||
Sbjct 18306 CTTACCCGTAAGGGTCTTGACGAAAATCTGCAT 18274
>seq270
Length=41675
Score = 86.0 bits (94), Expect = 2e-11
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 266973 ATCGGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTACGATTATTCCT 267032
|| || ||||| ||| | ||| |||||||| ||||||||||||||| | | ||
Sbjct 23781 ATTGGTGATAAGTTTGCGTCTCGTCACGGACAGAAAGGTACCATTGGTGTAACTTATCGC 23840
Query 267033 GAAGAAAATATGCCATTTAATGAAGATGGAATTAGACCTGATATTATTATTAATCCTCAT 267092
||||| ||||||| || | || || || | || || |||||||| || |||||
Sbjct 23841 CAAGAAGATATGCCGTTCACCTGCGAGGGCATCACTCCCGACATTATTATCAACCCTCAC 23900
Query 267093 GCTATTCCTAGTCGTATGACAATTG 267117
||||||||| ||||||||| ||||
Sbjct 23901 GCTATTCCTTCTCGTATGACCATTG 23925
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515237334920837
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