Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq76 293 3e-74 >seq76 Length=103561 Score = 293 bits (324), Expect = 3e-74 Identities = 525/757 (69%), Gaps = 10/757 (1%) Strand=Plus/Plus Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGAC-GACTACACGCGTGTCCGTGAGACGTAC 53251 ||||||| || ||| | |||||| || ||| | | || ||||| | ||||||||| Sbjct 2148 TCATGCGTGTTGCCGTCGGTATCTGGGGCGACCGTGTCGAC-CGTGTGCTCGAGACGTAC 2206 Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311 ||| ||| | ||| || || |||||| | || || |||||||||||||| ||| Sbjct 2207 AACTACATGTCCAGTAAGCTTTTCACACACGCCTCACCTACGCTGTTCAACGCTGGCACG 2266 Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371 || | ||| | ||| |||||| |||| | |||||||||||| || || || Sbjct 2267 CCGCAGGCCCAGCTATCGTCATGCTTCTTGGTCGACATGAAGGATGACAGCATTGAGGGT 2326 Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431 |||||||| ||||| ||| ||||| ||||||||| | | |||||||| || | Sbjct 2327 ATCTACGATACGCTGAAGACTTGTGCTATGATCTCCAAGATGGCCGGTGGTATTGGCCTG 2386 Query 53432 CACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489 || || | ||| ||| || | |||| | || || || |||||| | Sbjct 2387 AACG--TCCACCGTATCCGCGCCACCGGCTCGTACATTGCTGGCACTAACGGCACGTCAA 2444 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 | || |||||||| ||||| ||||||||||||||||| ||||| || || ||||||||| Sbjct 2445 ACGGCATCGTGCCCATGCTGCGCGTCTTCAACAACACCGCCCGCTATGTTGACCAGGGTG 2504 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 | |||||| || | || || |||||||| ||||||||||| ||||| | | | Sbjct 2505 GCAACAAGCGCCCTGGAGCCTTTGCTATCTACCTAGAGCCGTGGCATGCCGATGTCTTCG 2564 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTA 53669 |||| ||||| || || ||| || || | || ||||| || ||| |||||||| Sbjct 2565 AGTTCCTCGACCTACGCAAGAACCACGGCAAGGAGGAGATTCGTGCCCGCGACCTGTTCC 2624 Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729 ||| ||||||||||| ||||| |||||| | || |||||| ||| | ||| | Sbjct 2625 TAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAAGAACGCCAACTGGACAC 2684 Query 53730 TGATGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788 | |||||||| |||||||||||||| || | | || ||||||||| ||||| | | Sbjct 2685 TCATGTGCCCCAACGAGTGCCCCGGTCTGGCCGACTG-CTACGGTGACGAGTTCGAGGCT 2743 Query 53789 ATGTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGT 53847 |||| | ||||| || | |||||||| | | ||||||| | || | Sbjct 2744 CTGTACGAAAAGTACG-AGAGCGAGGGCCGCGGCCGCCTCACCATCAAGGCCCAGAAGCT 2802 Query 53848 ATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGA 53907 |||| | || |||||| || ||| ||||| |||| |||| |||| |||||||| Sbjct 2803 ATGGTACGCCATCCTCGAGGCCCAAACCGAGACCGGAAACCCGTTCATGCTGTACAAGGA 2862 Query 53908 TTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944 | | |||| ||||||||||||||||||| | ||| Sbjct 2863 TGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGGC 2899 Score = 98.7 bits (108), Expect = 1e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846 || |||||||| || | |||||| ||||| ||||| ||||||||| |||| | ||||| Sbjct 3725 GCCGATCGTGGCGCTTTCATCGATCAGTCGCAGTCGCTGAACATCCACATGAAAGATCCT 3784 Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906 | ||| ||| | | | ||||||||| || |||||| || |||||||| || Sbjct 3785 ACCATGGGCAAAATCACCAGCATGCACTTTGCTGGTTGGAAGCTTGGTCTCAAGACTGGC 3844 Query 55907 ATGTACTATCTGCGGACCC 55925 |||||||||||||| |||| Sbjct 3845 ATGTACTATCTGCGTACCC 3863 Score = 89.7 bits (98), Expect = 6e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 || ||||| |||||| | || || |||||||| || ||||| |||| ||| |||||||| Sbjct 3419 CGAAACTCGCTGCTCCTAGCCCCCATGCCAACTGCTTCGACCTCTCAAATCCTGGGCAAC 3478 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACC 55580 ||||| |||||||| ||||| |||||||||||| Sbjct 3479 AACGAATGCTTCGAGCCCTACACTTCCAACATCTACC 3515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547209987464200