Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq76 293 3e-74
>seq76
Length=103561
Score = 293 bits (324), Expect = 3e-74
Identities = 525/757 (69%), Gaps = 10/757 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGAC-GACTACACGCGTGTCCGTGAGACGTAC 53251
||||||| || ||| | |||||| || ||| | | || ||||| | |||||||||
Sbjct 2148 TCATGCGTGTTGCCGTCGGTATCTGGGGCGACCGTGTCGAC-CGTGTGCTCGAGACGTAC 2206
Query 53252 GACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACG 53311
||| ||| | ||| || || |||||| | || || |||||||||||||| |||
Sbjct 2207 AACTACATGTCCAGTAAGCTTTTCACACACGCCTCACCTACGCTGTTCAACGCTGGCACG 2266
Query 53312 AATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGC 53371
|| | ||| | ||| |||||| |||| | |||||||||||| || || ||
Sbjct 2267 CCGCAGGCCCAGCTATCGTCATGCTTCTTGGTCGACATGAAGGATGACAGCATTGAGGGT 2326
Query 53372 ATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATC 53431
|||||||| ||||| ||| ||||| ||||||||| | | |||||||| || |
Sbjct 2327 ATCTACGATACGCTGAAGACTTGTGCTATGATCTCCAAGATGGCCGGTGGTATTGGCCTG 2386
Query 53432 CACTGCTCGAACGT--CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489
|| || | ||| ||| || | |||| | || || || |||||| |
Sbjct 2387 AACG--TCCACCGTATCCGCGCCACCGGCTCGTACATTGCTGGCACTAACGGCACGTCAA 2444
Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549
| || |||||||| ||||| ||||||||||||||||| ||||| || || |||||||||
Sbjct 2445 ACGGCATCGTGCCCATGCTGCGCGTCTTCAACAACACCGCCCGCTATGTTGACCAGGGTG 2504
Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609
| |||||| || | || || |||||||| ||||||||||| ||||| | | |
Sbjct 2505 GCAACAAGCGCCCTGGAGCCTTTGCTATCTACCTAGAGCCGTGGCATGCCGATGTCTTCG 2564
Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTA 53669
|||| ||||| || || ||| || || | || ||||| || ||| ||||||||
Sbjct 2565 AGTTCCTCGACCTACGCAAGAACCACGGCAAGGAGGAGATTCGTGCCCGCGACCTGTTCC 2624
Query 53670 CAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACC 53729
||| ||||||||||| ||||| |||||| | || |||||| ||| | ||| |
Sbjct 2625 TAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAAGAACGCCAACTGGACAC 2684
Query 53730 TGATGTGCCCGAACGAGTGCCCCGGCCT-CCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788
| |||||||| |||||||||||||| || | | || ||||||||| ||||| | |
Sbjct 2685 TCATGTGCCCCAACGAGTGCCCCGGTCTGGCCGACTG-CTACGGTGACGAGTTCGAGGCT 2743
Query 53789 ATGTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGT 53847
|||| | ||||| || | |||||||| | | ||||||| | || |
Sbjct 2744 CTGTACGAAAAGTACG-AGAGCGAGGGCCGCGGCCGCCTCACCATCAAGGCCCAGAAGCT 2802
Query 53848 ATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGA 53907
|||| | || |||||| || ||| ||||| |||| |||| |||| ||||||||
Sbjct 2803 ATGGTACGCCATCCTCGAGGCCCAAACCGAGACCGGAAACCCGTTCATGCTGTACAAGGA 2862
Query 53908 TTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGC 53944
| | |||| ||||||||||||||||||| | |||
Sbjct 2863 TGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGGC 2899
Score = 98.7 bits (108), Expect = 1e-15
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 55787 GCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCT 55846
|| |||||||| || | |||||| ||||| ||||| ||||||||| |||| | |||||
Sbjct 3725 GCCGATCGTGGCGCTTTCATCGATCAGTCGCAGTCGCTGAACATCCACATGAAAGATCCT 3784
Query 55847 TCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGT 55906
| ||| ||| | | | ||||||||| || |||||| || |||||||| ||
Sbjct 3785 ACCATGGGCAAAATCACCAGCATGCACTTTGCTGGTTGGAAGCTTGGTCTCAAGACTGGC 3844
Query 55907 ATGTACTATCTGCGGACCC 55925
|||||||||||||| ||||
Sbjct 3845 ATGTACTATCTGCGTACCC 3863
Score = 89.7 bits (98), Expect = 6e-13
Identities = 78/97 (80%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|| ||||| |||||| | || || |||||||| || ||||| |||| ||| ||||||||
Sbjct 3419 CGAAACTCGCTGCTCCTAGCCCCCATGCCAACTGCTTCGACCTCTCAAATCCTGGGCAAC 3478
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACC 55580
||||| |||||||| ||||| ||||||||||||
Sbjct 3479 AACGAATGCTTCGAGCCCTACACTTCCAACATCTACC 3515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547209987464200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |