Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq76 282 5e-71
seq249 181 1e-40
seq404 136 5e-27
seq53 109 6e-19
seq133 105 8e-18
>seq76
Length=103561
Score = 282 bits (312), Expect = 5e-71
Identities = 852/1307 (65%), Gaps = 34/1307 (3%)
Strand=Plus/Minus
Query 80374 CGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGA 80433
||||| | || | ||| | |||||| ||||| || |||||||| || ||||| |||
Sbjct 3522 CGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGA 3463
Query 80434 GCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTG 80493
| || || || ||||| ||| | | | ||| || || |||| ||||||| ||||
Sbjct 3462 GAGGTCGAAGCAGTTGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCGTGCTGCTTG 3403
Query 80494 ATATCCTCGCGCAAATCTGACCAAAAATCAACCCCAA----CGCTG----TGACC--CCA 80543
|| | || | ||| | | || |||| ||||| |||| |||
Sbjct 3402 ATCTGTTC-------TTTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTGACATTCCA 3350
Query 80544 CATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCC 80603
||||||| ||||| ||||| | ||| | ||||| ||| | | ||| ||| | |||
Sbjct 3349 CATGTCGAACTGCAGAATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCC 3290
Query 80604 CTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGAC 80663
|| |||| || | ||| ||||| | | ||||| ||||| || ||| ||| || |
Sbjct 3289 TTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAAT 3230
Query 80664 GCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACAC 80723
||| |||| ||| |||| | ||||| | || || | | ||| |
Sbjct 3229 CTGCTTATTCAGCGTGCGGGCCTCGGCAGACTCGAAGGGCATGCGTAGAGCTAGGAAGGC 3170
Query 80724 GTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGC 80783
|| || || |||||||| || | | || |||||||||||| | || | ||
Sbjct 3169 ATCGGCTAGACCCTGAACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC 3110
Query 80784 CTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCG 80843
||| || | || ||| | || ||||||| ||||||||||||||| || |||
Sbjct 3109 CTCGGGCACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTT 3050
Query 80844 TGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT-------TC-ACAAATGCC 80895
|| | || || || ||||| ||||| | | | ||| | || ||||| | |
Sbjct 3049 GGTGATCTCGTGCAGCTTCTGGAAGTCATACTCG--CCCTTGTTGTAATCGACAAACGAC 2992
Query 80896 GGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACG 80955
|| ||| ||| || |||||||||||||| || ||||| |||| | |||||| |
Sbjct 2991 GGTAGGGCCAGCGAGGCCAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATG 2932
Query 80956 ATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCG 81015
|| || ||||||| || || || || |||||||| |||||||| ||| |
Sbjct 2931 ATCTCGGTGCACAGGTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTG 2872
Query 81016 TTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATG 81075
||||| || |||||||| |||| ||||| | ||||||||| || | || |||||||
Sbjct 2871 TTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATG 2812
Query 81076 GCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTG 81135
|||| ||| | || | ||||||| |||| ||| ||| | | |||||
Sbjct 2811 GCGTACCATAGCTTCTGGGCCTTGATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTT 2752
Query 81136 GCGTAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGG 81194
|||| | ||||||| | |||||| | || || | || | ||||||||||| ||
Sbjct 2751 TCGTACAGAGCCTCGAACTCGTCACCGTAGCAG-TCGGCCAGACCGGGGCACTCGTTGGG 2693
Query 81195 GCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCA 81254
|||||| || ||||| || || ||||| ||| ||||||||| ||| || |||||
Sbjct 2692 GCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCA 2633
Query 81255 GAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTC 81314
||||| ||||||||||||| || |||||| | || ||||| ||| | ||
Sbjct 2632 CAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTC 2573
Query 81315 GAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG 81374
||| || || | || || |||||||| ||||| || || | || | | || |||
Sbjct 2572 GAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCG 2513
Query 81375 ---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGAT 81431
||||||||||| || || ||||| || ||| || || |||| ||| || |
Sbjct 2512 CTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCAC 2453
Query 81432 GATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCT 81491
||| || | |||| ||||| || || | || ||| || ||||||| | |
Sbjct 2452 GATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTG 2393
Query 81492 GATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTC 81551
|| || || || ||||| | | ||| || ||| |||||| |||| || ||
Sbjct 2392 GACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATC 2333
Query 81552 ATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGG 81611
|| || ||||| ||||| || | |||||||| | |||||| || || | ||| ||
Sbjct 2332 GTAGATACCCTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GG 2274
Query 81612 GCT-TTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAA 81657
|| | ||| || |||||||| || || | ||||| |||||
Sbjct 2273 CCTGCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAAA 2227
Score = 93.3 bits (102), Expect = 5e-14
Identities = 111/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091
||| | || ||||||||||||||||| |||||||| || |||||| || | ||||
Sbjct 3867 GCCTGGGTACGCAGATAGTACATGCCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGC 3808
Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151
|| ||| || | | || || | | |||| ||||||||| ||||| ||||||
Sbjct 3807 ATGCTGGTGATTTTGCCCATGGTAGGATCTTTCATGTGGATGTTCAGCGACTGCGACTGA 3748
Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTT 80182
||||||||| |||||||| || |||||||
Sbjct 3747 TCGATGAAAGCGCCACGATCGGCGGCCATTT 3717
>seq249
Length=46353
Score = 181 bits (200), Expect = 1e-40
Identities = 178/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || || ||||| || || || |||||||||||||| |
Sbjct 8343 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 8402
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| | || | || || || || |||||||| ||||| ||||| |||
Sbjct 8403 GATACTATTGACAATGTCAAATCGAAGATCCAAGATAAGGAGGGTATTCCCCCAGATCAG 8462
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| |||||||| || ||||| | ||||||| |||||| || | ||||| ||
Sbjct 8463 CAGCGTCTGATTTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACTCTCTCTGACTACAAC 8522
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635
|||||||||| || || || ||||| || ||||||| || || || ||
Sbjct 8523 ATCCAAAAGGAGTCTACCCTACATCTGGTTCTGCGTCTGCGTGGAGGCCA 8572
Score = 170 bits (188), Expect = 2e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|||||||| ||||||||||| || || ||||| || || || || || || || ||
Sbjct 8115 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTAGAAGTCGAATCCTCC 8174
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| |||| ||| | || | || || || ||||||||||| || |||||||| |||
Sbjct 8175 GATACTATTGACAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCAGATCAG 8234
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| |||||||| || ||||| || ||||||| |||||||| | ||||| ||
Sbjct 8235 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 8294
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| |||||||| ||||| || | ||||| || |||||
Sbjct 8295 ATTCAAAAGGAGTCCACTCTCCATCTGGTTCTTCGTCTGCGTGGTGG 8341
Score = 168 bits (186), Expect = 8e-37
Identities = 159/203 (78%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489
||||||||||| || ||||||||||| ||||| || | ||| | ||| | ||| |
Sbjct 7618 ACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCCGACACCATCGACAATGTCAAGTCG 7677
Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549
|| |||||||| |||||||| ||||| ||||||||||||||||||||||| || || |||
Sbjct 7678 AAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAGCAGCGTCTAATTTTCGCCGGAAAG 7737
Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609
||||| ||||| | ||| ||||| | ||||| || |||| ||||| || ||||| ||
Sbjct 7738 CAACTTGAGGACGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCAC 7797
Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632
|| ||| | || || || |||||
Sbjct 7798 CTGGTCCTCCGCCTGCGTGGTGG 7820
Score = 158 bits (174), Expect = 1e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477
||||| || |||||||| ||||| || || || || || || || |||| ||||
Sbjct 7899 GTCAAAACCCTTACCGGAAAGACCATCACCCTAGAAGTCGAATCCTCCGATACTATTGAC 7958
Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537
||| | || | || || || ||||||||||| || ||||| || ||||||||||| |||
Sbjct 7959 AATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCGGATCAGCAGCGTCTGATT 8018
Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597
||||| || ||||| || ||||||| |||||||| | ||||| || ||||||||||
Sbjct 8019 TTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAAAAGGAG 8078
Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||||||| ||||| || | ||||| || |||||
Sbjct 8079 TCCACTCTCCATCTGGTTCTTCGTCTGCGTGGTGG 8113
>seq404
Length=24851
Score = 136 bits (150), Expect = 5e-27
Identities = 144/190 (76%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| ||||| || ||||| || || ||||||||||||||
Sbjct 18274 ATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTTGAGTCCTCA 18333
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| |||| || ||||| |||||||| ||||| || || ||
Sbjct 18334 GACACCATCGACAATGTCAAGTCTAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAA 18393
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || || ||||| ||||| || ||||||| || ||||| | ||||| ||
Sbjct 18394 CAGCGCCTGATCTTCGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTGTCCGACTACAAC 18453
Query 27586 GTCCAAAAGG 27595
|||| ||||
Sbjct 18454 ATCCAGAAGG 18463
>seq53
Length=118516
Score = 109 bits (120), Expect = 6e-19
Identities = 306/460 (67%), Gaps = 26/460 (6%)
Strand=Plus/Minus
Query 64708 TTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTC 64767
|||| |||||| || |||||||| ||| ||||| || ||||||||||| | ||
Sbjct 90204 TTTGCTCAGCGCCTAATCGCTTTTGCTGCTGTCGAAGGCATCTTCTTTTCTGGAGCCTTT 90145
Query 64768 TGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAG 64827
|| || || ||||| ||||| || |||||||| || ||| | ||||| ||||||
Sbjct 90144 GCCTCCATCTTTTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCTAACGAG 90085
Query 64828 CTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACC 64885
||||| ||||| || ||||| || ||| || ||||| | || ||||| |||||
Sbjct 90084 CTGATTTCTCGTGATGAGGGTCTGCACACTGACTTTGC--CTGCCTGTTGTTCTCCCACC 90027
Query 64886 TCAAGGACAAACCATCACATGGGACTATAATTGATATAGTAAA--ATC-----GGCTGTA 64938
| || || || | || || || ||| | || ||| ||| || ||
Sbjct 90026 TGAACAAC-CGCCCTGGCAAGGAAC-----TTG-TCGAGCAAATCATCACCGACGCCGTC 89974
Query 64939 GAAATTGAAAAGGAATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCC 64998
| ||||| ||||| ||| | |||| || ||||| || || | |||||||| | ||
Sbjct 89973 GTCATTGAGAAGGAGTTCCTGACTGAGGCTCTTCCTTGCGGTTTACTCGGCATGAACGCT 89914
Query 64999 GATAAGATGAAACAGTATATCGAATTTGTAGCAGATCGCCTGCTTACT-CAGTTTGGTA- 65056
|| |||||| |||||||| || || || || || || || |||| | |||| |
Sbjct 89913 GACCTGATGAAGCAGTATATTGAGTTCGTTGCCGACCGTCT-CTTAGTGGCCCTTGGCAA 89855
Query 65057 --TTAAGCCCTACTGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGA 65114
||| ||| | | || | || || || |||| ||||||| || ||||
Sbjct 89854 CGACAAGGTGTACCG---TGCTACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGG 89798
Query 65115 GGGGAAGACTAACTTTTTTGAAAAGAGGGTAGGTGATTAC 65154
||| ||||| |||||||| || || | || ||||| |||
Sbjct 89797 GGGCAAGACCAACTTTTTCGAGAAACGTGTTGGTGACTAC 89758
>seq133
Length=77988
Score = 105 bits (116), Expect = 8e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| |||||||| || || || ||||| ||||| || ||||| ||||| || | ||
Sbjct 32364 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATC 32305
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| || | ||| | || || || ||||||||||| ||||| || ||||| ||||| ||
Sbjct 32304 GACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCTG 32245
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| || ||||| ||||| || ||||||| || || | | ||||| || ||||||||
Sbjct 32244 ATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTTTGTCTGACTACAACATCCAAAAG 32185
Query 27595 G 27595
|
Sbjct 32184 G 32184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570304133714480
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