Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq76 282 5e-71 seq249 181 1e-40 seq404 136 5e-27 seq53 109 6e-19 seq133 105 8e-18 >seq76 Length=103561 Score = 282 bits (312), Expect = 5e-71 Identities = 852/1307 (65%), Gaps = 34/1307 (3%) Strand=Plus/Minus Query 80374 CGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGA 80433 ||||| | || | ||| | |||||| ||||| || |||||||| || ||||| ||| Sbjct 3522 CGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATTTGA 3463 Query 80434 GCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTG 80493 | || || || ||||| ||| | | | ||| || || |||| ||||||| |||| Sbjct 3462 GAGGTCGAAGCAGTTGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCGTGCTGCTTG 3403 Query 80494 ATATCCTCGCGCAAATCTGACCAAAAATCAACCCCAA----CGCTG----TGACC--CCA 80543 || | || | ||| | | || |||| ||||| |||| ||| Sbjct 3402 ATCTGTTC-------TTTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTGACATTCCA 3350 Query 80544 CATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCC 80603 ||||||| ||||| ||||| | ||| | ||||| ||| | | ||| ||| | ||| Sbjct 3349 CATGTCGAACTGCAGAATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAGGTGCC 3290 Query 80604 CTCCGTCTTGGCCAGCTCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGAC 80663 || |||| || | ||| ||||| | | ||||| ||||| || ||| ||| || | Sbjct 3289 TTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCGAAAAT 3230 Query 80664 GCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAGCCCATCATCATGAACAC 80723 ||| |||| ||| |||| | ||||| | || || | | ||| | Sbjct 3229 CTGCTTATTCAGCGTGCGGGCCTCGGCAGACTCGAAGGGCATGCGTAGAGCTAGGAAGGC 3170 Query 80724 GTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGC 80783 || || || |||||||| || | | || |||||||||||| | || | || Sbjct 3169 ATCGGCTAGACCCTGAACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTATGAGC 3110 Query 80784 CTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCG 80843 ||| || | || ||| | || ||||||| ||||||||||||||| || ||| Sbjct 3109 CTCGGGCACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACGACCTT 3050 Query 80844 TGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT-------TC-ACAAATGCC 80895 || | || || || ||||| ||||| | | | ||| | || ||||| | | Sbjct 3049 GGTGATCTCGTGCAGCTTCTGGAAGTCATACTCG--CCCTTGTTGTAATCGACAAACGAC 2992 Query 80896 GGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACG 80955 || ||| ||| || |||||||||||||| || ||||| |||| | |||||| | Sbjct 2991 GGTAGGGCCAGCGAGGCCAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTCGATG 2932 Query 80956 ATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCG 81015 || || ||||||| || || || || |||||||| |||||||| ||| | Sbjct 2931 ATCTCGGTGCACAGGTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTTCCTG 2872 Query 81016 TTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATG 81075 ||||| || |||||||| |||| ||||| | ||||||||| || | || ||||||| Sbjct 2871 TTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAGGATG 2812 Query 81076 GCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTG 81135 |||| ||| | || | ||||||| |||| ||| ||| | | ||||| Sbjct 2811 GCGTACCATAGCTTCTGGGCCTTGATGGTGAGGCGGCCGCGGCCCTCGCTCTCGTACTTT 2752 Query 81136 GCGTAAGCTTCGTCGAACTTGGCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGG 81194 |||| | ||||||| | |||||| | || || | || | ||||||||||| || Sbjct 2751 TCGTACAGAGCCTCGAACTCGTCACCGTAGCAG-TCGGCCAGACCGGGGCACTCGTTGGG 2693 Query 81195 GCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCA 81254 |||||| || ||||| || || ||||| ||| ||||||||| ||| || ||||| Sbjct 2692 GCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCA 2633 Query 81255 GAGGGCGGTGAACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTC 81314 ||||| ||||||||||||| || |||||| | || ||||| ||| | || Sbjct 2632 CAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTC 2573 Query 81315 GAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGCG 81374 ||| || || | || || |||||||| ||||| || || | || | | || ||| Sbjct 2572 GAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCG 2513 Query 81375 ---ACGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGAT 81431 ||||||||||| || || ||||| || ||| || || |||| ||| || | Sbjct 2512 CTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATGGGCAC 2453 Query 81432 GATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCT 81491 ||| || | |||| ||||| || || | || ||| || ||||||| | | Sbjct 2452 GATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTG 2393 Query 81492 GATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTC 81551 || || || || ||||| | | ||| || ||| |||||| |||| || || Sbjct 2392 GACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATC 2333 Query 81552 ATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGG 81611 || || ||||| ||||| || | |||||||| | |||||| || || | ||| || Sbjct 2332 GTAGATACCCTCAATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTG-GG 2274 Query 81612 GCT-TTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAA 81657 || | ||| || |||||||| || || | ||||| ||||| Sbjct 2273 CCTGCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAAA 2227 Score = 93.3 bits (102), Expect = 5e-14 Identities = 111/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 80032 GCCCGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGC 80091 ||| | || ||||||||||||||||| |||||||| || |||||| || | |||| Sbjct 3867 GCCTGGGTACGCAGATAGTACATGCCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGC 3808 Query 80092 ATAGAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGA 80151 || ||| || | | || || | | |||| ||||||||| ||||| |||||| Sbjct 3807 ATGCTGGTGATTTTGCCCATGGTAGGATCTTTCATGTGGATGTTCAGCGACTGCGACTGA 3748 Query 80152 CAGATGAAAGCCCCACGATCTGCCGCCATTT 80182 ||||||||| |||||||| || ||||||| Sbjct 3747 TCGATGAAAGCGCCACGATCGGCGGCCATTT 3717 >seq249 Length=46353 Score = 181 bits (200), Expect = 1e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || ||||| || || || |||||||||||||| | Sbjct 8343 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 8402 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || | || || || || |||||||| ||||| ||||| ||| Sbjct 8403 GATACTATTGACAATGTCAAATCGAAGATCCAAGATAAGGAGGGTATTCCCCCAGATCAG 8462 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||| || ||||| | ||||||| |||||| || | ||||| || Sbjct 8463 CAGCGTCTGATTTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACTCTCTCTGACTACAAC 8522 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||||||||| || || || ||||| || ||||||| || || || || Sbjct 8523 ATCCAAAAGGAGTCTACCCTACATCTGGTTCTGCGTCTGCGTGGAGGCCA 8572 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||||||||| || || ||||| || || || || || || || || Sbjct 8115 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTAGAAGTCGAATCCTCC 8174 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| | || | || || || ||||||||||| || |||||||| ||| Sbjct 8175 GATACTATTGACAATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCAGATCAG 8234 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||| || ||||| || ||||||| |||||||| | ||||| || Sbjct 8235 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 8294 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||||||| |||||||| ||||| || | ||||| || ||||| Sbjct 8295 ATTCAAAAGGAGTCCACTCTCCATCTGGTTCTTCGTCTGCGTGGTGG 8341 Score = 168 bits (186), Expect = 8e-37 Identities = 159/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||||||||| || ||||||||||| ||||| || | ||| | ||| | ||| | Sbjct 7618 ACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCCGACACCATCGACAATGTCAAGTCG 7677 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || |||||||| |||||||| ||||| ||||||||||||||||||||||| || || ||| Sbjct 7678 AAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAGCAGCGTCTAATTTTCGCCGGAAAG 7737 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| ||||| | ||| ||||| | ||||| || |||| ||||| || ||||| || Sbjct 7738 CAACTTGAGGACGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTCCAC 7797 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | || || || ||||| Sbjct 7798 CTGGTCCTCCGCCTGCGTGGTGG 7820 Score = 158 bits (174), Expect = 1e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 27418 GTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCA 27477 ||||| || |||||||| ||||| || || || || || || || |||| |||| Sbjct 7899 GTCAAAACCCTTACCGGAAAGACCATCACCCTAGAAGTCGAATCCTCCGATACTATTGAC 7958 Query 27478 AATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATT 27537 ||| | || | || || || ||||||||||| || ||||| || ||||||||||| ||| Sbjct 7959 AATGTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCGGATCAGCAGCGTCTGATT 8018 Query 27538 TTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAA 27597 ||||| || ||||| || ||||||| |||||||| | ||||| || |||||||||| Sbjct 8019 TTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAAAAGGAG 8078 Query 27598 TCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||| ||||| || | ||||| || ||||| Sbjct 8079 TCCACTCTCCATCTGGTTCTTCGTCTGCGTGGTGG 8113 >seq404 Length=24851 Score = 136 bits (150), Expect = 5e-27 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| ||||| || ||||| || || |||||||||||||| Sbjct 18274 ATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTTGAGTCCTCA 18333 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| |||| || ||||| |||||||| ||||| || || || Sbjct 18334 GACACCATCGACAATGTCAAGTCTAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAA 18393 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| ||||| || ||||||| || ||||| | ||||| || Sbjct 18394 CAGCGCCTGATCTTCGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTGTCCGACTACAAC 18453 Query 27586 GTCCAAAAGG 27595 |||| |||| Sbjct 18454 ATCCAGAAGG 18463 >seq53 Length=118516 Score = 109 bits (120), Expect = 6e-19 Identities = 306/460 (67%), Gaps = 26/460 (6%) Strand=Plus/Minus Query 64708 TTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTC 64767 |||| |||||| || |||||||| ||| ||||| || ||||||||||| | || Sbjct 90204 TTTGCTCAGCGCCTAATCGCTTTTGCTGCTGTCGAAGGCATCTTCTTTTCTGGAGCCTTT 90145 Query 64768 TGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAG 64827 || || || ||||| ||||| || |||||||| || ||| | ||||| |||||| Sbjct 90144 GCCTCCATCTTTTGGCTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCTAACGAG 90085 Query 64828 CTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCAGCCACC 64885 ||||| ||||| || ||||| || ||| || ||||| | || ||||| ||||| Sbjct 90084 CTGATTTCTCGTGATGAGGGTCTGCACACTGACTTTGC--CTGCCTGTTGTTCTCCCACC 90027 Query 64886 TCAAGGACAAACCATCACATGGGACTATAATTGATATAGTAAA--ATC-----GGCTGTA 64938 | || || || | || || || ||| | || ||| ||| || || Sbjct 90026 TGAACAAC-CGCCCTGGCAAGGAAC-----TTG-TCGAGCAAATCATCACCGACGCCGTC 89974 Query 64939 GAAATTGAAAAGGAATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGCC 64998 | ||||| ||||| ||| | |||| || ||||| || || | |||||||| | || Sbjct 89973 GTCATTGAGAAGGAGTTCCTGACTGAGGCTCTTCCTTGCGGTTTACTCGGCATGAACGCT 89914 Query 64999 GATAAGATGAAACAGTATATCGAATTTGTAGCAGATCGCCTGCTTACT-CAGTTTGGTA- 65056 || |||||| |||||||| || || || || || || || |||| | |||| | Sbjct 89913 GACCTGATGAAGCAGTATATTGAGTTCGTTGCCGACCGTCT-CTTAGTGGCCCTTGGCAA 89855 Query 65057 --TTAAGCCCTACTGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGA 65114 ||| ||| | | || | || || || |||| ||||||| || |||| Sbjct 89854 CGACAAGGTGTACCG---TGCTACCAACCCCTTCGACTTCATGGAGAACATTTCTCTGGG 89798 Query 65115 GGGGAAGACTAACTTTTTTGAAAAGAGGGTAGGTGATTAC 65154 ||| ||||| |||||||| || || | || ||||| ||| Sbjct 89797 GGGCAAGACCAACTTTTTCGAGAAACGTGTTGGTGACTAC 89758 >seq133 Length=77988 Score = 105 bits (116), Expect = 8e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474 || |||||||| || || || ||||| ||||| || ||||| ||||| || | || Sbjct 32364 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATC 32305 Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534 | || | ||| | || || || ||||||||||| ||||| || ||||| ||||| || Sbjct 32304 GACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCTG 32245 Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594 || || ||||| ||||| || ||||||| || || | | ||||| || |||||||| Sbjct 32244 ATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTTTGTCTGACTACAACATCCAAAAG 32185 Query 27595 G 27595 | Sbjct 32184 G 32184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570304133714480