Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq249 105 5e-18
>seq249
Length=46353
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||||||||| || ||||| ||||| ||| || || | || |||||| | ||
Sbjct 8115 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTAGAAGTCGAATCCTCC 8174
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || ||||| |||||| || || ||||| || ||| | || || |
Sbjct 8175 GATACTATTGACAAT--GTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCAGATC 8232
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
|||| || | ||||||||||| || || |||| || | || | | | ||||| ||||
Sbjct 8233 AGCAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACA 8292
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||| ||||| ||| |||| | ||| ||||| | ||| ||||||| ||
Sbjct 8293 ACATTCAAAAGGAGTCCACTCTCCATCTGGTTCTTCGTCTGCGTGGTGG 8341
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/217 (69%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 27802 GTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACCGA--CGATGTAC 27859
|| ||||| ||||| || || || || | || |||||| | |||| | || ||
Sbjct 7899 GTCAAAACCCTTACCGGAAAGACCATCACCCTAGAAGTCGAATCCTCCGATACTATTGAC 7958
Query 27860 AATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAA 27919
||| |||||| || || ||||| || ||| | || ||| ||||| || | |
Sbjct 7959 AAT--GTCAAATCGAAGATCCAAGACAAGGAGGGTATCCCTCCGGATCAGCAGCGTCTGA 8016
Query 27920 TTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAAAAAG 27979
|||||||||| || || |||| || | || | | | || || |||||||||||||| |
Sbjct 8017 TTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAAAAGG 8076
Query 27980 AGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|| |||| | ||| ||||| | ||| ||||||| ||
Sbjct 8077 AGTCCACTCTCCATCTGGTTCTTCGTCTGCGTGGTGG 8113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355858587712833
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |