Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq249 89.7 4e-13 >seq249 Length=46353 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| ||| || ||| ||| ||||| || || || |||| || || || | || || Sbjct 8323 ACCAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCC 8264 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| ||||| || ||||||||||| || | || | | ||| ||||| | Sbjct 8263 AGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGG 8204 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || ||| ||||| | | | |||||| || || || || | ||||| |||| Sbjct 8203 ATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGACTTCTAGGGTGATGGTTTTG 8144 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || ||||| |||||||| Sbjct 8143 CCAGTGAGAGTCTTGACAAAAATTTGCAT 8115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429540998358527