Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq249 122 6e-23
seq404 87.8 1e-12
>seq249
Length=46353
Score = 122 bits (134), Expect = 6e-23
Identities = 155/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| ||||| || || || ||||| || ||||| ||||| || ||||| || ||| |
Sbjct 8115 ATGCAAATTTTTGTCAAGACTCTCACTGGCAAAACCATCACCCTAGAAGTCGAATCCTCC 8174
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| ||| |||| ||| | ||| | || | | ||||| || ||| | || ||||||||
Sbjct 8175 GATACTATTGACAATGTCAAATCGAAGA-TCCAAGACAAGGAGGGTATCCCTCCAGATCA 8233
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||||||||| || ||||| || | || || | ||| |||||
Sbjct 8234 GCAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAA 8293
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820
||| ||||| |||||||| | ||| | |||
Sbjct 8294 CATTCAAAAGGAGTCCACTCTCCATCTGGTT 8324
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || ||||| || || ||||| || ||||| ||||| || || ||||| || |
Sbjct 8343 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 8402
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|| ||| |||| ||| | ||| | || | | || || || ||| | || ||||||||
Sbjct 8403 GATACTATTGACAATGTCAAATCGAAGA-TCCAAGATAAGGAGGGTATTCCCCCAGATCA 8461
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||||||||| || |||| || | || ||| | || |||||
Sbjct 8462 GCAGCGTCTGATTTTTGCCGGCAAGCAGTTGGAGGATGGTCGTACTCTCTCTGACTACAA 8521
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||| ||||| || ||||| | ||| | | |||| |||||
Sbjct 8522 CATCCAAAAGGAGTCTACCCTACATCTGGTTCTGCGTCTGCGTGGAGG 8569
Score = 107 bits (118), Expect = 1e-18
Identities = 146/201 (73%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680
|||| |||||||| || ||||| || ||||| || ||||| || ||| | || ||| |||
Sbjct 7897 TCGTCAAAACCCTTACCGGAAAGACCATCACCCTAGAAGTCGAATCCTCCGATACTATTG 7956
Query 23681 A-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTA 23739
| ||| | ||| | || | | ||||| || ||| | || || ||||| |||||| |
Sbjct 7957 ACAATGTCAAATCGAAGA-TCCAAGACAAGGAGGGTATCCCTCCGGATCAGCAGCGTCTG 8015
Query 23740 ATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAA 23799
|| ||||||||||| || ||||| || | || || | || |||||||| |||||
Sbjct 8016 ATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCTGACTACAACATCCAAAAG 8075
Query 23800 GAGTCCACATTACATTTAGTT 23820
|||||||| | ||| | |||
Sbjct 8076 GAGTCCACTCTCCATCTGGTT 8096
>seq404
Length=24851
Score = 87.8 bits (96), Expect = 1e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| || ||||| ||||| || |||||||| || || ||||| |||
Sbjct 18271 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTTGAGTCC 18330
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| | || ||| | || | || || || || || || | || || ||
Sbjct 18331 TCAGACACCATCGACAATGTCAAGTC-TAAGATCCAGGATAAGGAGGGCATTCCCCCGGA 18389
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||||||||| | || || || ||||| || || || || | ||||| | ||| ||
Sbjct 18390 TCAACAGCGCCTGATCTTCGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTGTCCGACTA 18449
Query 23787 CAACATACAAAA 23798
|||||| || ||
Sbjct 18450 CAACATCCAGAA 18461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338005978966532
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |