Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq53 156 4e-33
>seq53
Length=118516
Score = 156 bits (172), Expect = 4e-33
Identities = 374/561 (67%), Gaps = 11/561 (2%)
Strand=Plus/Plus
Query 4539 AACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAA 4598
||||| | || ||||| ||| |||| ||| || || | |||||| |||||||||
Sbjct 90035 AACAACAGGCAGGCAAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAA 90094
Query 4599 AACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCA 4658
|| || | |||||||| | ||| | ||| |||||||| || | |||||| | |||
Sbjct 90095 AAGGTCAGGCCGGGCATCAGACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCA 90154
Query 4659 GAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCG-GGACCCGAACGAGCTGGC 4717
|||||||| |||||||| || || ||||| || | || || || | || | | |
Sbjct 90155 GAAAAGAAGATGCCTTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGAT-TC 90213
Query 4718 TTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTA 4777
| |||| ||||| || | ||||||| ||||| | ||| ||||| ||||
Sbjct 90214 TCTGTCGCAGATCCACTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTC 90273
Query 4778 TATAGCGTTAAATA---ATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAG 4834
|||||||| || | | | | | || || || | ||| ||||| || || |
Sbjct 90274 AATAGCGTTGAACAGGTACGTGCGCTGGGCA---GGCTCCTTAATGTAAGTATCGATCAA 90330
Query 4835 TAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCT 4894
| || | || || || || || || || ||||| || || || ||||| |
Sbjct 90331 CAAAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACG 90390
Query 4895 AGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACC 4954
||| || | | || || ||| | | || | || || | ||| ||||| ||||| ||
Sbjct 90391 AGCCTCAGGGATCTGGACCTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACTATGCC 90450
Query 4955 GTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAA- 5013
||| ||| ||||| || |||| || ||||| || |||||||| ||||| |||
Sbjct 90451 ATCAGAGGCAGCAAAGAAGGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAG 90510
Query 5014 --GTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGA 5071
| || ||||||| | | | |||||| | || ||||| || ||| ||||||| |||||
Sbjct 90511 CCGGTTGTTCCAGTCGTGGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGA 90570
Query 5072 CGCTTCCGCTTTTTTGTACAT 5092
|| || || || ||||||||
Sbjct 90571 GGCCTCAGCCTTCTTGTACAT 90591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427045025097707
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |