Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq198 84.2 2e-11
>seq198
Length=57896
Score = 84.2 bits (92), Expect = 2e-11
Identities = 230/346 (66%), Gaps = 10/346 (3%)
Strand=Plus/Plus
Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 27443
||||||||| |||| || ||||||||| | || | |||||| || | | || |
Sbjct 9683 GGGGTTCCACGCGCTCATGATGATGCGACGATCATATGGGTTAGTCTTCAGCTTGTAGAT 9742
Query 27444 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATG--TCCGTGTAC 27501
| | | | |||||||| || ||| |||| || || | | | || |||
Sbjct 9743 GACCTCTGCGAGCTGATCGACGCCCTGGCCCGTATAATC--CGTTTGAGCATCGACGTAT 9800
Query 27502 TCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTG 27561
|| || |||||||| | ||||||||| || ||||| || || || || || | || | |
Sbjct 9801 TCCGCGCCGAAATGGCGCCATTGGAAGCCATACACAGGGCCTAGATCGCCGACATCGCGG 9860
Query 27562 TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACC 27621
|| | | ||| |||| | || || | ||||||||| ||||||||||||| ||
Sbjct 9861 TGACCAAGGCCTACGCTGTCGAGGAACTCGCGCGAACCGTTGCCGTCCCAGATCTTGACG 9920
Query 27622 CC--CTTCTCGGAGAGCT-CTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 27678
|| | || | ||| | | | |||| | | |||||| || |||||| || ||||||
Sbjct 9921 CCGGCGTCACTGAGTGGTAGTGAGGAGGTACT--ACCCTC-GATGAACCAAAGAAGCTCC 9977
Query 27679 TCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 27724
| | || ||| ||||| | |||||| |||||||| ||||
Sbjct 9978 GCGATGATGGCACGGGTGAAGACACGCTTGGTGGTGAGGAGTGGAA 10023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369503241538649
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |