Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq198 84.2 2e-11 >seq198 Length=57896 Score = 84.2 bits (92), Expect = 2e-11 Identities = 230/346 (66%), Gaps = 10/346 (3%) Strand=Plus/Plus Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 27443 ||||||||| |||| || ||||||||| | || | |||||| || | | || | Sbjct 9683 GGGGTTCCACGCGCTCATGATGATGCGACGATCATATGGGTTAGTCTTCAGCTTGTAGAT 9742 Query 27444 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATG--TCCGTGTAC 27501 | | | | |||||||| || ||| |||| || || | | | || ||| Sbjct 9743 GACCTCTGCGAGCTGATCGACGCCCTGGCCCGTATAATC--CGTTTGAGCATCGACGTAT 9800 Query 27502 TCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTG 27561 || || |||||||| | ||||||||| || ||||| || || || || || | || | | Sbjct 9801 TCCGCGCCGAAATGGCGCCATTGGAAGCCATACACAGGGCCTAGATCGCCGACATCGCGG 9860 Query 27562 TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACC 27621 || | | ||| |||| | || || | ||||||||| ||||||||||||| || Sbjct 9861 TGACCAAGGCCTACGCTGTCGAGGAACTCGCGCGAACCGTTGCCGTCCCAGATCTTGACG 9920 Query 27622 CC--CTTCTCGGAGAGCT-CTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 27678 || | || | ||| | | | |||| | | |||||| || |||||| || |||||| Sbjct 9921 CCGGCGTCACTGAGTGGTAGTGAGGAGGTACT--ACCCTC-GATGAACCAAAGAAGCTCC 9977 Query 27679 TCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 27724 | | || ||| ||||| | |||||| |||||||| |||| Sbjct 9978 GCGATGATGGCACGGGTGAAGACACGCTTGGTGGTGAGGAGTGGAA 10023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369503241538649