Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq76 170 3e-37
seq53 156 6e-33
>seq76
Length=103561
Score = 170 bits (188), Expect = 3e-37
Identities = 1006/1598 (63%), Gaps = 23/1598 (1%)
Strand=Plus/Minus
Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841
|| ||||| || |||| | |||| | ||||| ||||||||||| ||||| || |||
Sbjct 3891 GTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATGCCAGTCTTGAGA 3832
Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901
|| || |||| || || |||||||| || | |||| ||||||| ||
Sbjct 3831 CCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTAGGATCTTTCATG 3772
Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961
|| || |||| |||||| |||||||||||||| || | ||| || ||||||| | |
Sbjct 3771 TGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCGGCCATTTGCACA 3712
Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021
| ||| || | |||||||| | ||| ||| | | ||||| || | || |
Sbjct 3711 ACGGTGCGCTGGGAGATTTCCCAGACAGTCTTGTACAAGGCCTTGATGTCGGCAGGGATA 3652
Query 77022 TTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078
| | | || ||||| ||||| || || || ||||| || |||| |
Sbjct 3651 CTGGGAATGTTCTGAATCGAACCGTTGTCGCTGATGATACGGTTCTTCATGGCATCGGAC 3592
Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138
|| | || || | | || || || || || | || || || |||
Sbjct 3591 CAAAGACCGAGGTCGACTAGGTCCCGCAGCAGCCAGGGGTTGACGACCTGGAACTCGCCA 3532
Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198
| ||| || | ||| ||| || || || || || || | |||| ||||| |||
Sbjct 3531 GCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCC 3472
Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258
| ||||||| || |||||||||||||| || || | | | |||| | |||
Sbjct 3471 AGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCG 3412
Query 77259 TG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC--TGAAGGTACAACA 77315
|| || | |||| | ||||| || | ||| ||||| || || || ||| |||
Sbjct 3411 TGCTGCT-TGATCTGTTCTTTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTG--ACA 3355
Query 77316 TCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAA 77375
| ||| | ||| | || ||||| || | | || || || | ||| || ||
Sbjct 3354 TTCCACATGTCGAACTGCAGAATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAG 3295
Query 77376 GGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCG 77435
| ||||| || | ||| | || || || | || ||| || || || |||
Sbjct 3294 GTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCG 3235
Query 77436 AAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATA 77495
||||||| |||||| || | || || | || || || ||| | |
Sbjct 3234 AAAATCTGCTTATTCAGCGTGCGGGCCTCGGCAGACTCGAAGGGCATGCGTAGAGCTAGG 3175
Query 77496 AAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 77555
|||||||| |||| |||||||| |||| |||||||| | || | | ||||| |
Sbjct 3174 AAGGCATCGGCTAGACCCTGAACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTA 3115
Query 77556 TTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACT 77615
| ||| || || | ||||||||||| | ||| || || || || || | || ||
Sbjct 3114 TGAGCCTCGGGCACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACG 3055
Query 77616 ACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA-TCTTCCATCTA-TAA----CAAAC 77669
|| || | || | || || | || ||| | || || | | ||| |||||
Sbjct 3054 ACCTTGGTGATCTCGTGCAGCTTCTGGAAGTCATACTCGCCCTTGTTGTAATCGACAAAC 2995
Query 77670 -ATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTG 77728
| | | | || | || || ||||| || || || ||||||| || | | || |
Sbjct 2994 GACGGT-AGGGCCAGCGAGGCCAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTC 2936
Query 77729 TATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTT 77788
|| |||||||| || || || | |||||||||||| || | |||||||||||
Sbjct 2935 GATGATCTCGGTGCACAGGTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTT 2876
Query 77789 TTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGAT 77848
| ||||| | ||||| || || || ||||| | ||||| || | || | ||||
Sbjct 2875 CCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAG 2816
Query 77849 AATAGATTTCCAGACGACTCTAG-CTTTTATCATAGATTTGTATCGCCTCTCTCTTTCAT 77907
|| | | ||| | | ||| | | || || | | || | ||| || || |
Sbjct 2815 GATGGCGTACCATA-GCTTCTGGGCCTTGATGGTGAGGCGGCCGCGGCCCTCGCTCTCGT 2757
Query 77908 A--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTC 77965
| || ||| | |||| || || || || || | || ||| || ||||| ||
Sbjct 2756 ACTTTTCGTACAGAGCC--TCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTC 2699
Query 77966 ATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGG 78025
|| |||||||| | || ||||| | | | || || || ||||| || || || ||
Sbjct 2698 GTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGG 2639
Query 78026 TATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTT 78085
||||| || || | || || || |||| | | || || || || |||||
Sbjct 2638 AATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCG 2579
Query 78086 AAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCC 78145
|| ||||| ||||| | | ||| | |||||| || ||||| || || || | ||||
Sbjct 2578 TAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCC 2519
Query 78146 AGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACAT 78205
||| || || || || ||||| || | ||| | ||||||||| || | || | || |||
Sbjct 2518 AGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCAT 2459
Query 78206 TGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT 78265
|| | || ||||| || || || || || |||| ||| || || | ||||| ||
Sbjct 2458 GGGCACGATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGAT 2399
Query 78266 ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAA 78325
| | | | || || || || |||||||| || || | ||| ||| ||||
Sbjct 2398 ACGGTGGACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAG 2339
Query 78326 TGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363
||||||||||||||||| || ||||||||| ||||||
Sbjct 2338 CGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGT 2301
>seq53
Length=118516
Score = 156 bits (172), Expect = 6e-33
Identities = 373/560 (67%), Gaps = 12/560 (2%)
Strand=Plus/Plus
Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200
|| ||||| ||| || ||||| ||||| | | ||| | ||||||||||| || ||
Sbjct 90044 CAGGCAAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGG 90103
Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260
|||||||| || ||||| || |||||||| || | || || | ||||||||||||
Sbjct 90104 CCGGGCATCAGACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCAGAAAAGAAG 90163
Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTC---GTTGTGT 48317
|||||||| || || ||||| ||| | || | || | || | | ||| || |
Sbjct 90164 ATGCCTTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAG 90223
Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377
|||||| | ||||| || || || || || || || || || ||||| ||
Sbjct 90224 ATCCACTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTG 90283
Query 48378 AAGAGAAA---GtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATAC 48434
|| || | | | || || || |||| ||||||||| || || | | ||
Sbjct 90284 AACAGGTACGTGCGCTGGGCA-GGC--TCCTTAATGTAAGTATCGATCAACAAAGAGTAG 90340
Query 48435 ATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTG 48494
| |||||||| || || || || ||||| || || || || || | || || | |
Sbjct 90341 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGG 90400
Query 48495 ATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCA 48554
||||| ||||| | | || || ||| ||| ||||| || ||||| |||||| |||
Sbjct 90401 ATCTGGACCTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACTATGCCATCAGAGGCA 90460
Query 48555 GCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCG---TTGGAAGTCAGTTTATTC 48611
||||| || || | | || || || || | ||| |||| | | | || |||
Sbjct 90461 GCAAAGAAGGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTC 90520
Query 48612 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCT 48671
||||| | || |||||| |||| ||| | || ||||| ||||| || || ||||| ||
Sbjct 90521 CAGTCGTGGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCC 90580
Query 48672 TTTTTATACATATTCCATAT 48691
|| || ||||| | ||| ||
Sbjct 90581 TTCTTGTACATCTGCCAGAT 90600
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694661167326560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |