Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq76 170 3e-37 seq53 156 6e-33 >seq76 Length=103561 Score = 170 bits (188), Expect = 3e-37 Identities = 1006/1598 (63%), Gaps = 23/1598 (1%) Strand=Plus/Minus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || ||||| || |||| | |||| | ||||| ||||||||||| ||||| || ||| Sbjct 3891 GTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATGCCAGTCTTGAGA 3832 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || || |||| || || |||||||| || | |||| ||||||| || Sbjct 3831 CCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTAGGATCTTTCATG 3772 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 || || |||| |||||| |||||||||||||| || | ||| || ||||||| | | Sbjct 3771 TGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCGGCCATTTGCACA 3712 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 | ||| || | |||||||| | ||| ||| | | ||||| || | || | Sbjct 3711 ACGGTGCGCTGGGAGATTTCCCAGACAGTCTTGTACAAGGCCTTGATGTCGGCAGGGATA 3652 Query 77022 TTTGTA---TTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 | | | || ||||| ||||| || || || ||||| || |||| | Sbjct 3651 CTGGGAATGTTCTGAATCGAACCGTTGTCGCTGATGATACGGTTCTTCATGGCATCGGAC 3592 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 || | || || | | || || || || || | || || || ||| Sbjct 3591 CAAAGACCGAGGTCGACTAGGTCCCGCAGCAGCCAGGGGTTGACGACCTGGAACTCGCCA 3532 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | ||| || | ||| ||| || || || || || || | |||| ||||| ||| Sbjct 3531 GCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCC 3472 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 77258 | ||||||| || |||||||||||||| || || | | | |||| | ||| Sbjct 3471 AGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTAGGAGCAGCGAGTTTCGCACACCG 3412 Query 77259 TG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC--TGAAGGTACAACA 77315 || || | |||| | ||||| || | ||| ||||| || || || ||| ||| Sbjct 3411 TGCTGCT-TGATCTGTTCTTTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGTG--ACA 3355 Query 77316 TCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAA 77375 | ||| | ||| | || ||||| || | | || || || | ||| || || Sbjct 3354 TTCCACATGTCGAACTGCAGAATGCCTTGCGAAACAGGAGAGCCCTCATAGGTCGAGTAG 3295 Query 77376 GGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCG 77435 | ||||| || | ||| | || || || | || ||| || || || ||| Sbjct 3294 GTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATGGTCTCG 3235 Query 77436 AAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATA 77495 ||||||| |||||| || | || || | || || || ||| | | Sbjct 3234 AAAATCTGCTTATTCAGCGTGCGGGCCTCGGCAGACTCGAAGGGCATGCGTAGAGCTAGG 3175 Query 77496 AAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 77555 |||||||| |||| |||||||| |||| |||||||| | || | | ||||| | Sbjct 3174 AAGGCATCGGCTAGACCCTGAACACCAACTCCAATAGGGCGGTGGCGCATATTGCTGTTA 3115 Query 77556 TTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACT 77615 | ||| || || | ||||||||||| | ||| || || || || || | || || Sbjct 3114 TGAGCCTCGGGCACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTTGCGCACGACG 3055 Query 77616 ACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAA-TCTTCCATCTA-TAA----CAAAC 77669 || || | || | || || | || ||| | || || | | ||| ||||| Sbjct 3054 ACCTTGGTGATCTCGTGCAGCTTCTGGAAGTCATACTCGCCCTTGTTGTAATCGACAAAC 2995 Query 77670 -ATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTG 77728 | | | | || | || || ||||| || || || ||||||| || | | || | Sbjct 2994 GACGGT-AGGGCCAGCGAGGCCAGATTGCACACAGCGACCTCATCAGGGGCGCAGTACTC 2936 Query 77729 TATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTT 77788 || |||||||| || || || | |||||||||||| || | ||||||||||| Sbjct 2935 GATGATCTCGGTGCACAGGTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTGGTTGCTCTT 2876 Query 77789 TTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGAT 77848 | ||||| | ||||| || || || ||||| | ||||| || | || | |||| Sbjct 2875 CCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTGGGCCTCGAG 2816 Query 77849 AATAGATTTCCAGACGACTCTAG-CTTTTATCATAGATTTGTATCGCCTCTCTCTTTCAT 77907 || | | ||| | | ||| | | || || | | || | ||| || || | Sbjct 2815 GATGGCGTACCATA-GCTTCTGGGCCTTGATGGTGAGGCGGCCGCGGCCCTCGCTCTCGT 2757 Query 77908 A--TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTC 77965 | || ||| | |||| || || || || || | || ||| || ||||| || Sbjct 2756 ACTTTTCGTACAGAGCC--TCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTC 2699 Query 77966 ATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGG 78025 || |||||||| | || ||||| | | | || || || ||||| || || || || Sbjct 2698 GTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGG 2639 Query 78026 TATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTT 78085 ||||| || || | || || || |||| | | || || || || ||||| Sbjct 2638 AATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCG 2579 Query 78086 AAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCC 78145 || ||||| ||||| | | ||| | |||||| || ||||| || || || | |||| Sbjct 2578 TAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCC 2519 Query 78146 AGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACAT 78205 ||| || || || || ||||| || | ||| | ||||||||| || | || | || ||| Sbjct 2518 AGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCAT 2459 Query 78206 TGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT 78265 || | || ||||| || || || || || |||| ||| || || | ||||| || Sbjct 2458 GGGCACGATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGAT 2399 Query 78266 ATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAA 78325 | | | | || || || || |||||||| || || | ||| ||| |||| Sbjct 2398 ACGGTGGACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAG 2339 Query 78326 TGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363 ||||||||||||||||| || ||||||||| |||||| Sbjct 2338 CGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGT 2301 >seq53 Length=118516 Score = 156 bits (172), Expect = 6e-33 Identities = 373/560 (67%), Gaps = 12/560 (2%) Strand=Plus/Plus Query 48141 CATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGA 48200 || ||||| ||| || ||||| ||||| | | ||| | ||||||||||| || || Sbjct 90044 CAGGCAAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGG 90103 Query 48201 CCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAAT 48260 |||||||| || ||||| || |||||||| || | || || | |||||||||||| Sbjct 90104 CCGGGCATCAGACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCAGAAAAGAAG 90163 Query 48261 ATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTC---GTTGTGT 48317 |||||||| || || ||||| ||| | || | || | || | | ||| || | Sbjct 90164 ATGCCTTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAG 90223 Query 48318 ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377 |||||| | ||||| || || || || || || || || || ||||| || Sbjct 90224 ATCCACTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTG 90283 Query 48378 AAGAGAAA---GtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATAC 48434 || || | | | || || || |||| ||||||||| || || | | || Sbjct 90284 AACAGGTACGTGCGCTGGGCA-GGC--TCCTTAATGTAAGTATCGATCAACAAAGAGTAG 90340 Query 48435 ATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTG 48494 | |||||||| || || || || ||||| || || || || || | || || | | Sbjct 90341 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGG 90400 Query 48495 ATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCA 48554 ||||| ||||| | | || || ||| ||| ||||| || ||||| |||||| ||| Sbjct 90401 ATCTGGACCTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACTATGCCATCAGAGGCA 90460 Query 48555 GCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCG---TTGGAAGTCAGTTTATTC 48611 ||||| || || | | || || || || | ||| |||| | | | || ||| Sbjct 90461 GCAAAGAAGGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTC 90520 Query 48612 CAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCT 48671 ||||| | || |||||| |||| ||| | || ||||| ||||| || || ||||| || Sbjct 90521 CAGTCGTGGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCC 90580 Query 48672 TTTTTATACATATTCCATAT 48691 || || ||||| | ||| || Sbjct 90581 TTCTTGTACATCTGCCAGAT 90600 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694661167326560