Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016- 05-09] 879 sequences; 32,692,340 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq53 168 1e-36 seq76 118 2e-21 >seq53 Length=118516 Score = 168 bits (186), Expect = 1e-36 Identities = 553/854 (65%), Gaps = 18/854 (2%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 || ||||| ||||| ||||||||||||||||| || || ||||| ||| || || || Sbjct 89753 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 89812 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || || || || || ||| || || | || | || | | | Sbjct 89813 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGTTGCCAAGGGCCACTAAG 89872 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || | || |||||||| || |||||| ||||||| ||| ||||| || |||| Sbjct 89873 AGACGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCC---GAGT 89929 Query 46519 TTGACCG----GTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATAT 46574 |||| | |||||||| || || ||||| | ||||| ||| || || | || Sbjct 89930 AA-ACCGCAAGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGAT 89988 Query 46575 TATCGATGTT--ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACAT 46632 || || | || ||||| | || | | ||| || |||| | || Sbjct 89989 GATT--TGCTCGACAAGTTCCTTGCCAGGGCGGTTGTTCAGGTGGGAGAACAACAGGCAG 90046 Query 46633 GCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCA 46692 ||||| ||| || || || ||||| | | ||| | ||||||||||| || || || Sbjct 90047 GCAAAGTCAGTGTGCAGACCCTCATCACGAGAAATCAGCTCGTTAGAAAAGGTCAGGCCG 90106 Query 46693 GGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATG 46752 ||||| || |||||||| |||||||| || | || || | |||||||||||| ||| Sbjct 90107 GGCATCAGACCACGCTTGCGCAGCCAAAAGATGGAGGCAAAGGCTCCAGAAAAGAAGATG 90166 Query 46753 CCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATC 46809 ||||| ||||| || || |||| || | || | || | | || | | ||| Sbjct 90167 CCTTCGACAGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATC 90226 Query 46810 CACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAG 46869 ||| | ||||||| || || || || || || || || || ||||| || || Sbjct 90227 CACTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAAC 90286 Query 46870 AGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCT 46929 || | | | || || |||| || ||||| || || | | || | || Sbjct 90287 AGGTACGTGCGCTGGGCAGGCTCCTTAATGTAAGTATCGATCAACAAAGAGTAGGTCTCG 90346 Query 46930 GAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGT 46989 || || ||||| || || ||||| || || || || || | || |||| ||||| Sbjct 90347 GAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGG 90406 Query 46990 ACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAA 47049 ||||| | | || || ||| || ||||| || ||||| |||||| |||||||| Sbjct 90407 ACCTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACTATGCCATCAGAGGCAGCAAAG 90466 Query 47050 AATGCCAATACATGTTTAATAAAATATTTTTCATC---GGTAGTCAGTTTATTCCAGTCA 47106 || |||| | || || || || | || || |||| | | || |||||||| Sbjct 90467 AAGGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAGTCG 90526 Query 47107 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTA 47166 | || |||||| |||| ||| | || ||||| |||||||| || ||||| || || || Sbjct 90527 TGGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTG 90586 Query 47167 TACATATTCCATAT 47180 ||||| | ||| || Sbjct 90587 TACATCTGCCAGAT 90600 >seq76 Length=103561 Score = 118 bits (130), Expect = 2e-21 Identities = 1002/1607 (62%), Gaps = 32/1607 (2%) Strand=Plus/Minus Query 75373 CAAC-GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 |||| |||||||| ||||||| || || | | ||||| ||||||||||| ||||| | Sbjct 3896 CAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATGCCAGTCT 3837 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 | ||||| || |||| || || |||||||| || | |||| | ||||| Sbjct 3836 TGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTAGGATCTT 3777 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 || || || |||| |||||| |||||||||||||| || | ||| || ||||||| Sbjct 3776 TCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCGGCCATTT 3717 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 | || ||| || | |||||||| | ||| ||| | | ||||| || | | Sbjct 3716 GCACAACGGTGCGCTGGGAGATTTCCCAGACAGTCTTGTACAAGGCCTTGATGTCGGCAG 3657 Query 75612 GAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 | | | | | | || ||||| || ||| || || || ||||| || ||| Sbjct 3656 GGATACTGGGAATGTTCTGAATCGAACCGTTGTCGCTGATGATACGGTTCTTCATGGCAT 3597 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 | ||| | ||| || | | || || || || || | || || | Sbjct 3596 CGGACCAAAGACCGAGGTCGACTAGGTCCCGCAGCAGCCAGGGGTTGACGACCTGGAACT 3537 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 | |||| ||| || | || ||| || || || || || || | |||| |||| Sbjct 3536 CGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGT 3477 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848 | |||| ||||||| || |||||||| ||||| || || | | | |||| | Sbjct 3476 TGCCCAGGATTTGAGAGGTCGAAGCAGTTGGCATGGGGGCTAGGAGCAGCGAGTTTCGCA 3417 Query 75849 GACCATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGAT--CTGATGGTA 75905 ||| || || | |||| | ||||| || | ||| ||||| || | ||| ||| Sbjct 3416 CACCGTGCTGCT-TGATCTGTTCTTTGAGCGAGGCCCAGTCCCACAGGTCGCTGGGGGT- 3359 Query 75906 CAACATCCCAGAGATCGTATTGTAGAATTCCGTTGC-TAGCATATGATCCATTATATGTT 75964 |||| ||| | ||| | || ||||| || |||| | || || || | ||| || Sbjct 3358 -GACATTCCACATGTCGAACTGCAGAATGCC-TTGCGAAACAGGAGAGCCCTCATAGGTC 3301 Query 75965 TCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATT 76024 ||| || || || | | ||| | ||||| || || || ||| || || Sbjct 3300 GAGTAGGTGCCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGCGGCGTGGTAGATG 3241 Query 76025 GTTTCGAAAATCTTCTTATTAAGATCTTGC--GCTTC--AAGACTATCAAAAGGATAATG 76080 || |||||||||| |||||| || | ||| || || |||| || || || | Sbjct 3240 GTCTCGAAAATCTGCTTATTCAG--CGTGCGGGCCTCGGCAGAC--TCGAAGGGCATGCG 3185 Query 76081 TAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTT 76140 || | | || ||||| ||||| |||||||| |||| |||||||| | || | | | Sbjct 3184 TAGAGCTAGGAAGGCATCGGCTAGACCCTGAACACCAACTCCAATAGGGCGGTGGCGCAT 3125 Query 76141 ATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATT 76200 |||| | | ||| || || | || |||||||| | || || || || || || Sbjct 3124 ATTGCTGTTATGAGCCTCGGGCACGGGATAATAATTGACGTCGATGATGCGGTTCAGGTT 3065 Query 76201 TCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCAT-----CT 76255 | || || || || | || | || || | || ||| | | || | Sbjct 3064 GCGCACGACGACCTTGGTGATCTCGTGCAGCTTCTGGAAGTCATACTCGCCCTTGTTGTA 3005 Query 76256 ATC-ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATT 76314 ||| |||||| || || | || || ||||| || || || ||||||| || Sbjct 3004 ATCGACAAACGACGGTAGGGCCAGCGAGGCCAGATTGCACACAGCGACCTCATCAGGGGC 2945 Query 76315 GGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTG 76374 | || | || ||||| ||||| || || | |||||| || || || | || Sbjct 2944 GCAGTACTCGATGATCTCGGTGCACAGGTTGGAGCTGCGGATAGTGCCCAGGTTCTTCTG 2885 Query 76375 GTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTG 76434 ||||||||| |||| || | ||||| || || | ||||| |||| || || | || Sbjct 2884 GTTGCTCTTCCTGTTGCAGGCATCCTTGTACAGCATGAACGGGTTTCCGGTCTCGGTTTG 2825 Query 76435 TGATTCGATAATAGATTTCCAGACGACTCT-AGCTTTTATTATAGATTTGTATCGCTTCT 76493 | |||| || | | ||| | | ||| || || || | | || || Sbjct 2824 GGCCTCGAGGATGGCGTACCATA-GCTTCTGGGCCTTGATGGTGAGGCGGCCGCGGCCCT 2766 Query 76494 CTCTTTCATA--TTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551 | || || || || ||| | | || || || || || || | || ||| ||| Sbjct 2765 CGCTCTCGTACTTTTCGTACAGAGCC--TCGAACTCGTCACCGTAGCAGTCGGCCAGACC 2708 Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAA 76611 || || || || || ||||| | || ||| | | | | || || || ||||| || Sbjct 2707 GGGGCACTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCGACACGCTTCATGAA 2648 Query 76612 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGT 76671 || || || ||||| || || | || || || |||| | | || || || || Sbjct 2647 CAGGTCGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTG 2588 Query 76672 ATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGC 76731 ||||| || || |||||||| | | ||| | |||||| || ||||| || || || Sbjct 2587 GTTCTTGCGTAGGTCGAGGAACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGC 2528 Query 76732 CATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAAC 76791 | | || || || || || || ||||| || | ||| | ||| ||||| || | || Sbjct 2527 AAAGGCTCCAGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGAC 2468 Query 76792 TCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACA 76851 | || ||| || | |||||||| || || || || || |||| ||| || || Sbjct 2467 GCGCAGCATGGGCACGATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAGCCGGT 2408 Query 76852 TGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACA 76911 || || ||| | ||||| || || || ||||| || ||||| | |||||| Sbjct 2407 GGCGCGGATACGGTGGACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACA 2348 Query 76912 GCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGT 76958 |||| || || ||||| ||||| || || |||||| |||||| Sbjct 2347 AGTCTTCAGCGTATCGTAGATACCCTCAATGCTGTCATCCTTCATGT 2301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712926566633280