Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq249 178 3e-39
seq133 161 2e-34
seq404 152 1e-31
>seq249
Length=46353
Score = 178 bits (196), Expect = 3e-39
Identities = 170/218 (78%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| ||||| |||||||| | ||| || |||||||||||||||||||
Sbjct 8114 ACCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGA 8055
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| || || || |||||||| |||| ||| || || || ||
Sbjct 8054 GAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGG 7995
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||||||||||| | ||| || | || ||||| || || | ||||||
Sbjct 7994 GATACCCTCCTTGTCTTGGATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGAC 7935
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
||| || ||||| ||||| || || | || || ||||
Sbjct 7934 TTCTAGGGTGATGGTCTTTCCGGTAAGGGTTTTGACGA 7897
Score = 178 bits (196), Expect = 3e-39
Identities = 176/228 (77%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| ||||| |||||||| | ||| || ||||| ||||||||||| |
Sbjct 8342 ACCACCACGCAGACGAAGAACCAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCGGA 8283
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||||||||| || || || |||||||| |||| ||| || || || ||
Sbjct 8282 GAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGAGG 8223
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||||||||||||||||| | ||| || | || ||||| || || | ||||||
Sbjct 8222 GATACCCTCCTTGTCTTGGATCTTCGATTTGACATTGTCAATAGTATCGGAGGATTCGAC 8163
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || ||||| || || || || | |||||| || || || |||||
Sbjct 8162 TTCTAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACAAAAATTTGCAT 8115
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| |||||||| || || |||||||||| || || |||||||||||||||||||
Sbjct 8569 CCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAG 8510
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || |||||||| | || || |||||||| |||| ||| || || || |||
Sbjct 8509 AGAGTACGACCATCCTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGGGGA 8450
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||||||||| ||||||||||| | ||| || | || ||||| || |||| || ||
Sbjct 8449 ATACCCTCCTTATCTTGGATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAACC 8390
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||| || || || || | |||||| ||||| || |||||
Sbjct 8389 TCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 8343
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || ||||| || | || || || |||||||||||||| |
Sbjct 7821 ACCACCACGCAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 7762
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||| || ||||| ||||| || ||||| || || | ||| || ||||| ||
Sbjct 7761 CAGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGGGGG 7702
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||| || || ||||| | || || | ||||| ||||| |||| |||||
Sbjct 7701 AATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCGAC 7642
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| |||||||| ||||| || ||
Sbjct 7641 CTCAAGAGTGATGGTCTTGCCGGT 7618
>seq133
Length=77988
Score = 161 bits (178), Expect = 2e-34
Identities = 143/179 (80%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
||||||||||||||||||| | |||||||||||||| || || || || || ||||||
Sbjct 32186 TTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 32245
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| || |||||||| ||||| |||||||||||||||||||| | || ||| | |||
Sbjct 32246 AGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 32305
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| |||||||| | ||||| || || || || ||||||||||||| ||||| |||||
Sbjct 32306 ATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 32364
>seq404
Length=24851
Score = 152 bits (168), Expect = 1e-31
Identities = 150/194 (77%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| | || ||||||||||||||||| || || || || ||||||
Sbjct 18461 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGATC 18402
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| || ||||| || ||||| |||||||| || |||||||| | || || | |||
Sbjct 18401 AGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGTCG 18342
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAAT 283091
|| ||||| || | || || || || ||||||||||||||||| | ||||| |||||
Sbjct 18341 ATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGACGAAA 18282
Query 283092 ATCTGCATTTTCAT 283105
|||||||| || ||
Sbjct 18281 ATCTGCATCTTGAT 18268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046727411426866
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |