Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20laricicola_20[genbank_20GCA_5F001640655.1_202016-
05-09] 879 sequences; 32,692,340 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq249 132 3e-26
seq404 111 1e-19
seq133 87.8 1e-12
>seq249
Length=46353
Score = 132 bits (146), Expect = 3e-26
Identities = 157/211 (74%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||| || || ||| ||||||||| |||||||| |||| ||| || | || |||
Sbjct 8323 ACCAGATGGAGAGTGGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCC 8264
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| |||||||| |||| |||||||||||||| ||| | ||| ||||| ||
Sbjct 8263 AGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGAGGGATACCCTCCTTGTCTTGG 8204
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| || || ||| | || || |||| |||||| || || | || || || |
Sbjct 8203 ATCTTCGATTTGACATTGT--CAATAGTATCGGAGGATTCGACTTCTAGGGTGATGGTTT 8146
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||| ||||| || || ||||||||
Sbjct 8145 TGCCAGTGAGAGTCTTGACAAAAATTTGCAT 8115
Score = 123 bits (136), Expect = 2e-23
Identities = 149/201 (74%), Gaps = 4/201 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||| || || ||| |||||||||||||||||| || | ||| || | || |||
Sbjct 8095 ACCAGATGGAGAGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGGGTACGGCCATCCTCC 8036
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| |||||||| |||| |||||||||||| | ||| | ||| ||||| ||
Sbjct 8035 AGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGGATACCCTCCTTGTCTTGG 7976
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| || || ||| | || || |||| |||||| || || | || || ||||
Sbjct 7975 ATCTTCGATTTGACATTGT--CAATAGTATCGGAGGATTCGACTTCTAGGGTGATGGTCT 7918
Query 44307 TTCCCGTGAGGGTCTTCACGA 44327
|||| || ||||| || ||||
Sbjct 7917 TTCCGGTAAGGGTTTTGACGA 7897
Score = 120 bits (132), Expect = 2e-22
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || ||||| || || || |||||||||||||||||| || | |
Sbjct 8569 CCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGGATGTTGTAGTCAGAG 8510
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || | || |||| |||||| |||||||| |||| |||||||||||||| ||
Sbjct 8509 AGAGTACGACCATCCTCCAACTGCTTGCCGGCAAAAATCAGACGCTGCTGATCTGGGGGA 8450
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| ||| ||||| || |||||| || || ||| | || || || | || || |
Sbjct 8449 ATACCCTCCTTATCTTGGATCTTCGATTTGACATTGT--CAATAGTATCAGAAGACTCAA 8392
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| | || || || || || ||||| ||||| ||||||||||||||
Sbjct 8391 CCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 8343
Score = 102 bits (112), Expect = 6e-17
Identities = 136/187 (73%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || || |||||| ||||||||||| |||| || ||| |||| ||
Sbjct 7802 ACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCA 7743
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| || || | ||||||||| |||| || | ||| ||||| |||
Sbjct 7742 AGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGA 7683
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| || ||| | |||||||||| || || ||||| | || || ||||
Sbjct 7682 ATCTTCGACTTGACATTGT--CGATGGTGTCGGAAGACTCGACCTCAAGAGTGATGGTCT 7625
Query 44307 TTCCCGT 44313
| || ||
Sbjct 7624 TGCCGGT 7618
>seq404
Length=24851
Score = 111 bits (122), Expect = 1e-19
Identities = 141/192 (73%), Gaps = 4/192 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| |||| || ||| | || || |||||||| || || ||||
Sbjct 18463 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGA 18404
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| ||||| ||||| | || | || ||||| ||| ||||| ||| || |||
Sbjct 18403 TCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGT 18344
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| |||||||| | ||| || ||||| | || |||||||| ||||| |||||||| ||
Sbjct 18343 --CGATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGAC 18286
Query 44326 GAAGATTTGCAT 44337
||| || |||||
Sbjct 18285 GAAAATCTGCAT 18274
>seq133
Length=77988
Score = 87.8 bits (96), Expect = 1e-12
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||||||||||||||| || | | ||| | || || |||||||| || || ||||
Sbjct 32184 CCTTTTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 32243
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267
||| ||||| || || | || | || ||||| || ||||| ||| | |
Sbjct 32244 TCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGT 32303
Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327
| || ||||| | ||| || ||||||| ||||| ||||| ||||| |||||||| ||||
Sbjct 32304 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 32363
Query 44328 A 44328
|
Sbjct 32364 A 32364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359986543490343
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |