Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq425 134 1e-26
>seq425
Length=119061
Score = 134 bits (148), Expect = 1e-26
Identities = 380/582 (65%), Gaps = 9/582 (2%)
Strand=Plus/Plus
Query 16180 GTTTAGGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGAT 16239
||| ||||| |||| ||| || || ||||| || || || || || | | ||
Sbjct 45550 GTTCAGGTGGGAGAACAATAGGCAGGCAAAGTCAGTGTGCAGACCCTCATCACGGGAAAT 45609
Query 16240 AAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGC 16299
|| ||||| ||||| || | || ||||| || || || | ||| || || |
Sbjct 45610 CAGCTCGTTAGAAAAGGTCAGGCCGGGCATCAGACCACGCTTGCGCAGCCAAAAGATAGA 45669
Query 16300 AGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGC 16359
||||| | || |||||||| || ||||| || | ||||||||||||| || | ||
Sbjct 45670 GGCAAAGGCTCCAGAAAAGAAGATGCCCTCGACGGCAGCAAAAGCGATTAGGCGCTGAGC 45729
Query 16360 GTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACA 16419
| || | ||| | | | |||||||| | |||| |||||||| | ||| ||
Sbjct 45730 AAAAGTTGATTCTCTGTCGCAGATCCATTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCA 45789
Query 16420 ATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATA---TCGATTATATA 16476
|| || || || || || |||| | | | ||| | || | |||||
Sbjct 45790 GGGAATGGTGTCAATAGCGTTGAACAGGTACG---TGCGCTGGGCAGGCTCCTTGATATA 45846
Query 16477 CGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCC 16536
||||| |||| ||| ||| | || ||||| |||||||| || ||||| || ||
Sbjct 45847 AGTATCGATCAACAAAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACC 45906
Query 16537 ATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTC 16596
||||||||| |||||||| | || || || || | | || || || ||||||||||
Sbjct 45907 ATAGAAGCAACGAGCCTCAGGGATCTGGACCTCGCCAGAGAAACGCTCAACCAGGTTCTC 45966
Query 16597 ATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTC 16656
|| || || || ||| |||||||| || |||| ||||| ||||| || | ||
Sbjct 45967 GTTGACAATGCCATCAGAGGCAGCAAAGAAGGCCAGAATGTGAGAGATGAAGTACTGCTC 46026
Query 16657 GTCAGATGTAA---GAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGG 16713
||| |||| | | | ||| || | | ||||||||||| ||| | || || |
Sbjct 46027 GTCCTTGGTAAGCCGGTTGTTCCAGTCGTGGAGATCTTTGGATAGATCAATCTCCTCAGC 46086
Query 16714 CGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755
||||| || ||| | ||||| |||||||| | ||| ||
Sbjct 46087 AGTCCAGAACGAGGCCTCAGCCTTCTTATACATCTGCCAGAT 46128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511408563483160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |