Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq425 224 1e-53 seq366 114 1e-20 seq355 109 6e-19 seq24 100 3e-16 >seq425 Length=119061 Score = 224 bits (248), Expect = 1e-53 Identities = 492/729 (67%), Gaps = 15/729 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||| || ||||| ||||| ||||||||||| | |||||| | || || Sbjct 46128 ATCTGGCAGATGTATAAGAAGGCTGAGGCCTCGTTCTGGACTGCTGAGGAGATTGATCTA 46069 Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751 ||||| || | | | ||||||| | || | | | | |||||| | |||||| Sbjct 46068 TCCAAAGATCTCCA-CGACTGGAACAACCGGCTTACCAAGGACGAGCAGTACTTCATCTC 46010 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| | |||||||| || || ||| || ||||| ||||||||||| ||||| ||||| Sbjct 46009 TCACATTCTGGCCTTCTTTGCTGCCTCTGATGGCATTGTCAACGAGAACCTGGTTGAGCG 45950 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 |||| || ||||| ||| | | ||||| || |||||||| || || |||||| || Sbjct 45949 TTTCTCTGGCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTATGGTTTCCAGATCATGAT 45890 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTT 116927 ||||||| | ||||| || | || || | ||||| || || | | || || Sbjct 45889 GGAGAACATCCACTCCGAGACCTACTCTTTGTTGATCGATACTTATATCAAGGAGC-CTG 45831 Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987 | || | | || |||| ||||| || || || || || ||| | || | Sbjct 45830 CCCAGCGCACGTACC---TGTTCAACGCTATTGACACCATTCCCTGCATACGCCGCAAAG 45774 Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047 |||| ||||| || |||||| || |||||| | | || | ||||||| | | Sbjct 45773 CCGACTGGGCTCTCAAATGGATCTGCGACAGAGAATCAACTTTTGCTCAGCGCCTAATCG 45714 Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107 | || || |||||||||||| |||||||||| || || ||| | || |||||||| Sbjct 45713 CTTTTGCTGCCGTCGAGGGCATCTTCTTTTCTGGAGCCTTTGCCTCTATCTTTTGGCTGC 45654 Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 || || || || |||||||||||||| || |||||||| || ||| | || |||| Sbjct 45653 GCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCCCGTGATGAGG 45594 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227 ||||||| ||||||||||| | ||||| || || | || || || || Sbjct 45593 GTCTGCACACTGACTTTGCCTGCCTATTGTTCTCCCACCTGAACAACCGCCCTGGCAAGG 45534 Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287 | || | | ||| |||||||||| |||| ||| ||| || ||||| || || | Sbjct 45533 AACTTGTTGAGCAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCCTGACTGAGG 45474 Query 117288 CGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346 | || || ||| || | || || | || || |||| ||| || || |||||| Sbjct 45473 CTCTTCC-TTGCGGTTTACTCGGCATGAACGCTGACCTGATGAAGCAGTATATTGAGTTC 45415 Query 117347 GTCGCCGAC 117355 || |||||| Sbjct 45414 GTTGCCGAC 45406 >seq366 Length=80546 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||||||||||||| | || || || | | Sbjct 27550 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 27491 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | |||| || |||| || || ||||| ||||| |||| ||| Sbjct 27490 GATACTATTGACAATGTCAAATCGAAGATTCAAGATAAGGAGGGTATCCCTCCGGATCAG 27431 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | || ||||| |||||||| || | || |||||| |||||||||| Sbjct 27430 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 27371 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || || |||||| | || || ||||| || |||| || | || ||| Sbjct 27370 ATTCAAAAGGAGTCTACCCTACATCTGGTTCTGCGTCTGCGTGGAGGC 27323 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773 || ||||| |||||||| |||| ||||| | |||||| | | | | ||||| Sbjct 28123 ACCGGCAAGACCATCACTCTCGAGGTCGAGTCTTCCGACACCATCGACAATGTCAAGTCG 28064 Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 || |||| || || ||||| || ||| | |||||||| || || || | ||| || || Sbjct 28063 AAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAGCAGCGTCTAATTTTCGCCGGAAAG 28004 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 || || || |||| |||||||| ||||||||| |||||||||||| | || || || Sbjct 28003 CAACTTGAGGACGGTCGCACCCTGTCCGACTACAATATCCAGAAGGAGTCTACTCTCCAC 27944 Query 40894 CTAGTGTTGCGCTTGAGGGGCGG 40916 || || | ||| || | || || Sbjct 27943 CTGGTCCTCCGCCTGCGTGGTGG 27921 >seq355 Length=31638 Score = 109 bits (120), Expect = 6e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || ||||| || || |||||| | || || || || Sbjct 6469 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTTGAGTCC 6410 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | ||||| || || | || || |||||||| ||| |||| Sbjct 6409 TCAGACACCATCGACAATGTCAAGTCTAAGATCCAGGATAAGGAGGGCATTCCCCCGGAT 6350 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || || || || |||| ||| ||||| ||||| || || | |||||||| ||||||| Sbjct 6349 CAACAGCGCCTGATCTTCGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTGTCCGACTAC 6290 Query 40867 AACATCCAGAAGG 40879 ||||||||||||| Sbjct 6289 AACATCCAGAAGG 6277 >seq24 Length=141979 Score = 100 bits (110), Expect = 3e-16 Identities = 133/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || ||||| || ||||| ||| | || ||||| || | |||| | Sbjct 81089 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATC 81148 Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817 | |||| ||||| || || | ||||| |||||||| ||| ||||||| || || || Sbjct 81149 GACAACG-TCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCT 81207 Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| ||| ||||| ||||| || || | ||||| | ||||||||||||||||| Sbjct 81208 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTTTGTCTGACTACAACATCCAGAA 81267 Query 40878 GG 40879 || Sbjct 81268 GG 81269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515213320060880