Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq425 224 1e-53
seq366 114 1e-20
seq355 109 6e-19
seq24 100 3e-16
>seq425
Length=119061
Score = 224 bits (248), Expect = 1e-53
Identities = 492/729 (67%), Gaps = 15/729 (2%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| ||||| || ||||| ||||| ||||||||||| | |||||| | || ||
Sbjct 46128 ATCTGGCAGATGTATAAGAAGGCTGAGGCCTCGTTCTGGACTGCTGAGGAGATTGATCTA 46069
Query 116696 TCCAAGGA-CACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAA 116751
||||| || | | | ||||||| | || | | | | |||||| | ||||||
Sbjct 46068 TCCAAAGATCTCCA-CGACTGGAACAACCGGCTTACCAAGGACGAGCAGTACTTCATCTC 46010
Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811
||| | |||||||| || || ||| || ||||| ||||||||||| ||||| |||||
Sbjct 46009 TCACATTCTGGCCTTCTTTGCTGCCTCTGATGGCATTGTCAACGAGAACCTGGTTGAGCG 45950
Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
|||| || ||||| ||| | | ||||| || |||||||| || || |||||| ||
Sbjct 45949 TTTCTCTGGCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTATGGTTTCCAGATCATGAT 45890
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTT 116927
||||||| | ||||| || | || || | ||||| || || | | || ||
Sbjct 45889 GGAGAACATCCACTCCGAGACCTACTCTTTGTTGATCGATACTTATATCAAGGAGC-CTG 45831
Query 116928 CGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987
| || | | || |||| ||||| || || || || || ||| | || |
Sbjct 45830 CCCAGCGCACGTACC---TGTTCAACGCTATTGACACCATTCCCTGCATACGCCGCAAAG 45774
Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGG 117047
|||| ||||| || |||||| || |||||| | | || | ||||||| | |
Sbjct 45773 CCGACTGGGCTCTCAAATGGATCTGCGACAGAGAATCAACTTTTGCTCAGCGCCTAATCG 45714
Query 117048 CCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCA 117107
| || || |||||||||||| |||||||||| || || ||| | || ||||||||
Sbjct 45713 CTTTTGCTGCCGTCGAGGGCATCTTCTTTTCTGGAGCCTTTGCCTCTATCTTTTGGCTGC 45654
Query 117108 AGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167
|| || || || |||||||||||||| || |||||||| || ||| | || ||||
Sbjct 45653 GCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCCCGTGATGAGG 45594
Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227
||||||| ||||||||||| | ||||| || || | || || || ||
Sbjct 45593 GTCTGCACACTGACTTTGCCTGCCTATTGTTCTCCCACCTGAACAACCGCCCTGGCAAGG 45534
Query 117228 CGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAG 117287
| || | | ||| |||||||||| |||| ||| ||| || ||||| || || |
Sbjct 45533 AACTTGTTGAGCAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCCTGACTGAGG 45474
Query 117288 CGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346
| || || ||| || | || || | || || |||| ||| || || ||||||
Sbjct 45473 CTCTTCC-TTGCGGTTTACTCGGCATGAACGCTGACCTGATGAAGCAGTATATTGAGTTC 45415
Query 117347 GTCGCCGAC 117355
|| ||||||
Sbjct 45414 GTTGCCGAC 45406
>seq366
Length=80546
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| || || ||||| ||||||||||||||| | || || || | |
Sbjct 27550 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 27491
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | |||| || |||| || || ||||| ||||| |||| |||
Sbjct 27490 GATACTATTGACAATGTCAAATCGAAGATTCAAGATAAGGAGGGTATCCCTCCGGATCAG 27431
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || || | || ||||| |||||||| || | || |||||| ||||||||||
Sbjct 27430 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 27371
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|| || |||||| | || || ||||| || |||| || | || |||
Sbjct 27370 ATTCAAAAGGAGTCTACCCTACATCTGGTTCTGCGTCTGCGTGGAGGC 27323
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773
|| ||||| |||||||| |||| ||||| | |||||| | | | | |||||
Sbjct 28123 ACCGGCAAGACCATCACTCTCGAGGTCGAGTCTTCCGACACCATCGACAATGTCAAGTCG 28064
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| |||| || || ||||| || ||| | |||||||| || || || | ||| || ||
Sbjct 28063 AAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAGCAGCGTCTAATTTTCGCCGGAAAG 28004
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893
|| || || |||| |||||||| ||||||||| |||||||||||| | || || ||
Sbjct 28003 CAACTTGAGGACGGTCGCACCCTGTCCGACTACAATATCCAGAAGGAGTCTACTCTCCAC 27944
Query 40894 CTAGTGTTGCGCTTGAGGGGCGG 40916
|| || | ||| || | || ||
Sbjct 27943 CTGGTCCTCCGCCTGCGTGGTGG 27921
>seq355
Length=31638
Score = 109 bits (120), Expect = 6e-19
Identities = 140/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || || ||||| || || |||||| | || || || ||
Sbjct 6469 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTTGAGTCC 6410
Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
| |||| | | | | ||||| || || | || || |||||||| ||| ||||
Sbjct 6409 TCAGACACCATCGACAATGTCAAGTCTAAGATCCAGGATAAGGAGGGCATTCCCCCGGAT 6350
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
|| || || || |||| ||| ||||| ||||| || || | |||||||| |||||||
Sbjct 6349 CAACAGCGCCTGATCTTCGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTGTCCGACTAC 6290
Query 40867 AACATCCAGAAGG 40879
|||||||||||||
Sbjct 6289 AACATCCAGAAGG 6277
>seq24
Length=141979
Score = 100 bits (110), Expect = 3e-16
Identities = 133/182 (73%), Gaps = 2/182 (1%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| | || ||||| || | |||| |
Sbjct 81089 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATC 81148
Query 40759 CA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACT 40817
| |||| ||||| || || | ||||| |||||||| ||| ||||||| || || ||
Sbjct 81149 GACAACG-TCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCT 81207
Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877
|||| ||| ||||| ||||| || || | ||||| | |||||||||||||||||
Sbjct 81208 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTTTGTCTGACTACAACATCCAGAA 81267
Query 40878 GG 40879
||
Sbjct 81268 GG 81269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515213320060880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |