Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq366 107 2e-18
seq355 105 6e-18
seq24 100 2e-16
>seq366
Length=80546
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| |||||||||||||| ||| | || || |||||| ||||| || ||
Sbjct 27354 GTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCG 27413
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| | || |||||||||||||| ||||| || |||||||| ||| ||| || |||
Sbjct 27414 GCAAAAATCAGACGCTGCTGATCCGGAGGGATACCCTCCTTATCTTGAATCTTCGATTTG 27473
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | || || | ||| ||||| | ||| | |||||||| || |||||
Sbjct 27474 ACATTGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATGGTTTTGCCAGTGAGAGTC 27533
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || || |||||
Sbjct 27534 TTGACGAAGATTTGCAT 27550
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||| ||||| |||||||| || || || ||||| ||| || ||||| |||||
Sbjct 27939 ACCAGGTGGAGAGTAGACTCCTTCTGGATATTGTAGTCGGACAGGGTGCGACCGTCCTCA 27998
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
|| || ||||| ||| | || ||||||||||| || || || || |||||||| || |
Sbjct 27999 AGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGA 28058
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| |||||| | ||||||||||| || | || |||
Sbjct 28059 ATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTG 28118
Query 118710 CCGGT 118714
|||||
Sbjct 28119 CCGGT 28123
>seq355
Length=31638
Score = 105 bits (116), Expect = 6e-18
Identities = 136/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| || ||||| |||||| ||||| || |||||| ||||
Sbjct 6279 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGATC 6338
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| ||||| ||||| || || ||||||||||| || || || || || | |||
Sbjct 6339 AGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGTCG 6398
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| |||||| | | ||| ||||| | ||| | ||| || || || || || || || |||
Sbjct 6399 ATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGACGAAA 6458
Query 118731 ATCTGCAT 118738
||||||||
Sbjct 6459 ATCTGCAT 6466
>seq24
Length=141979
Score = 100 bits (110), Expect = 2e-16
Identities = 130/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| || || |||||| |||||| ||||| || |||||| ||||
Sbjct 81267 TTCTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 81208
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|| ||||| || || || || ||||||||||||||| || || || || | |||
Sbjct 81207 AGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 81148
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 118730
| ||||||| | ||||||||| | ||| | || || || ||||| || || || |||
Sbjct 81147 ATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 81088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433825572687796
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |