Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq142 91.5 3e-13 >seq142 Length=98154 Score = 91.5 bits (100), Expect = 3e-13 Identities = 388/605 (64%), Gaps = 31/605 (5%) Strand=Plus/Plus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| || ||||| ||||| ||||||||| ||||| | || |||||| Sbjct 2096 TACCAGTACTTTGGCTTTAAAACCTTGGAGCGATCGTATCTGCTCAAGTTGGACGGCAAG 2155 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||||| || || ||||||||| | ||||| || || ||||| || | || ||| Sbjct 2156 ATCGTCGAGCGTCCGCAGCACATGATCATGCGTGTTGCCGTCGGTAT---CTGGGGCGAC 2212 Query 248938 ---ATAGAGAGCGTGCTCGAGACGTACACCGGAATG---AGTGAACGCTGGATGACACAT 248991 | || | |||||||||||||||| | ||| ||| | ||| | ||||| Sbjct 2213 CGTGTCGACCGTGTGCTCGAGACGTACAACTACATGTCCAGT--AAGCT-TTTCACACAC 2269 Query 248992 GCCACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTT 249051 ||| |||| ||||| |||||||| || || | ||||| || ||||| | Sbjct 2270 GCCTCACCTACGCTGTTCAACGCTGGCACGCCGCAGGCCCAGCTATCGTCATGCTTCTTG 2329 Query 249052 CTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC---GGCG 249108 | | |||| | || ||| | || || || || || ||||| | |||| || Sbjct 2330 GTCGACATGAAGGATGACAGCATTGAGGGTATCTACGATACGCTGA---AGACTTGTGCT 2386 Query 249109 AAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGT 249168 | ||| || || | || || || || || || |||| | ||||| || | || Sbjct 2387 ATGATCTCCAAGATGGCCGGTGGTATTGGCCTGAACGTCCACCGTATCCGCGCCACCGGC 2446 Query 249169 TCGTACATCAAAGGTACAAATGG--GGTCAGTGATGGTATCGTACCCCTCCTTCGATGCT 249226 |||||||| || || || || |||| | || ||||| || | || || || Sbjct 2447 TCGTACATTGCTGGCACTAACGGCACGTCA--AACGGCATCGTGCCTATGCTGCGCGTCT 2504 Query 249227 TTGAGTCCACCGCCAGGTTCATCAACCAGGCCGG------GCGCCGAAAGGGGTCGTTCG 249280 | | ||||||| | | | |||||| || ||||| || | || | Sbjct 2505 TCAACAACACCGCCCGCTATGTTGACCAGGGTGGCAACAAGCGCC---CTGGAGCCTTTG 2561 Query 249281 CCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACA 249340 | || || | || |||||| |||||| | || |||||||| ||| | |||||| Sbjct 2562 CTATCTACCTAGAGCCGTGGCATGCCGATGTCTTCGAGTTCCTCGACCTACGCAAGAACC 2621 Query 249341 ACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGT 249400 ||||||| ||| || | || || ||||| ||| | ||||||| | ||||| ||| Sbjct 2622 ACGGCAAGGAGGAGATTCGTGCCCGCGACCTGTTCCTAGCCCTGTGGATTCCCGACCTGT 2681 Query 249401 TCATG 249405 ||||| Sbjct 2682 TCATG 2686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073753839281984