Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq425 172 7e-38
seq142 86.0 8e-12
>seq425
Length=119061
Score = 172 bits (190), Expect = 7e-38
Identities = 557/854 (65%), Gaps = 18/854 (2%)
Strand=Plus/Plus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
|| ||||| ||||| |||||||| |||||||| || || || || ||| || || ||
Sbjct 45281 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 45340
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATT--CAGAAA 33408
|||||||| || || || |||||| || ||| | || | | |||| || ||
Sbjct 45341 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGT-TGCCAAGGGCCACTAA 45399
Query 33409 TCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGA 33468
| | || || ||||| || ||||| ||||||| ||| ||||| || ||
Sbjct 45400 GAGA-CGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCC---GA 45455
Query 33469 GTTTAACT---GGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTA 33525
|| | | ||||||||| |||| || || || | |||||| || || | || |
Sbjct 45456 GTAAACCGCAAGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGA 45515
Query 33526 TAATAAATCTAACG-GTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACAT 33584
| || ||| ||| ||| | || || ||| | || |||| | ||
Sbjct 45516 TGATTTGCTCAACAAGTTCCTTGCCAGGGCGGTTGTTC-AGGTGGGAGAACAATAGGCAG 45574
Query 33585 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCG 33644
|| || || |||||||||||| || | ||| | ||||||||||| || || |||
Sbjct 45575 GCAAAGTCAGTGTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAAAAGGTCAGGCCG 45634
Query 33645 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATT 33704
||||| || |||||||| |||||||| || || || || | ||| |||||||||||
Sbjct 45635 GGCATCAGACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCCAGAAAAGAAGATG 45694
Query 33705 CCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATC 33761
|| || || |||||||| || || || | || || || | | ||||| |||
Sbjct 45695 CCCTCGACGGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATC 45754
Query 33762 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 33821
|| || ||||||| ||||| || || || || || || || || || || ||
Sbjct 45755 CATTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAAC 45814
Query 33822 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCC 33881
|| || | | | || || | ||||||||||||||| | | || | ||
Sbjct 45815 AGGTACGTGCGCTGGGCAGGCTCCTTGATATAAGTATCGATCAACAAAGAGTAGGTCTCG 45874
Query 33882 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGC 33941
|| || ||||| || || ||||| || || ||||| || | |||||| | |||||
Sbjct 45875 GAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGG 45934
Query 33942 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAA 34001
|| || | | || || || | | || || || || || |||||| ||| |||||
Sbjct 45935 ACCTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCATCAGAGGCAGCAAAG 45994
Query 34002 AACGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGT-GTTAGTTTATTCCAATCA 34058
|| |||| | || || || || | ||||| |||| | || ||||| ||
Sbjct 45995 AAGGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAGTCG 46054
Query 34059 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 34118
| || |||||| |||| ||| | || || | ||||| || || ||||| ||||| |||
Sbjct 46055 TGGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTA 46114
Query 34119 TACATATTCCAGAT 34132
||||| | ||||||
Sbjct 46115 TACATCTGCCAGAT 46128
>seq142
Length=98154
Score = 86.0 bits (94), Expect = 8e-12
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 62034 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62093
|||| ||| | ||||| || |||||||||| |||| | ||||| |||||||||||
Sbjct 3936 TCCTGGTCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATG 3877
Query 62094 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62153
|| || || ||||| || |||| || ||| ||||| || || | |||| |
Sbjct 3876 CCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTA 3817
Query 62154 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62213
|||||| || ||||| |||| || || ||||||||||| || || | || ||
Sbjct 3816 GGATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCG 3757
Query 62214 GCCATTT 62220
|||||||
Sbjct 3756 GCCATTT 3750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629810412206640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |