Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq425 138 1e-27 seq142 86.0 8e-12 >seq425 Length=119061 Score = 138 bits (152), Expect = 1e-27 Identities = 358/543 (66%), Gaps = 6/543 (1%) Strand=Plus/Plus Query 36172 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 36231 ||| |||||||| || | ||| | ||||| ||||| || || |||||||| || || Sbjct 45586 GTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGGCATCAGACC 45645 Query 36232 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 36291 |||||| |||||||| || || ||||| | |||||||||||| || || || || || Sbjct 45646 ACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCCAGAAAAGAAGATGCCCTCGACGGC 45705 Query 36292 CGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCCACTTTTGAGC 36348 ||||| || || || | || || || | | ||||| ||||| || |||| Sbjct 45706 AGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATCCATTTGAGAGC 45765 Query 36349 CCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttt 36408 ||| ||||| || || || || || || || ||||| || || || || | Sbjct 45766 CCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAACAGGTACGTGCG 45825 Query 36409 ttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTT 36468 | | || || | ||| ||||| ||||| | | || | || || || ||||| Sbjct 45826 CTGGGCAGGCTCCTTGATATAAGTATCGATCAACAAAGAGTAGGTCTCGGAGTGGATGTT 45885 Query 36469 TTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACA 36528 || || || || || || ||||| || | |||||| | ||||| || || | | Sbjct 45886 CTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGGACCTCGCCAGA 45945 Query 36529 AAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATAC 36588 || || || | | || || || || || || ||| ||| ||||| || |||| | Sbjct 45946 GAAACGCTCAACCAGGTTCTCGTTGACAATGCCATCAGAGGCAGCAAAGAAGGCCAGAAT 46005 Query 36589 ATGTTTTATAAAATATTTTTCGT--TTGGT-GTTAGTTTATTCCAATCATTGATATCTTT 36645 || || || || | |||| ||||| | || ||||| || | || |||||| Sbjct 46006 GTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAGTCGTGGAGATCTTT 46065 Query 36646 AGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 36705 |||| ||| | || || | ||||| || || ||||| ||||| |||||||| | ||| Sbjct 46066 GGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTATACATCTGCCA 46125 Query 36706 GAT 36708 ||| Sbjct 46126 GAT 46128 >seq142 Length=98154 Score = 86.0 bits (94), Expect = 8e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 64827 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 64886 |||| ||| | ||||| || |||||||||| |||| | ||||| ||||||||||| Sbjct 3936 TCCTGGTCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATG 3877 Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 64946 || || || ||||| || |||| || ||| ||||| || || | |||| | Sbjct 3876 CCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTA 3817 Query 64947 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 65006 |||||| || ||||| |||| || || ||||||||||| || || | || || Sbjct 3816 GGATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCG 3757 Query 65007 GCCATTT 65013 ||||||| Sbjct 3756 GCCATTT 3750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658165288602920