Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq425 156 6e-33
>seq425
Length=119061
Score = 156 bits (172), Expect = 6e-33
Identities = 552/852 (65%), Gaps = 14/852 (2%)
Strand=Plus/Plus
Query 49669 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 49728
|| ||||| ||||| |||||||| |||||||| || || || || ||| || || ||
Sbjct 45281 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 45340
Query 49729 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATT--CAGAAA 49786
|||||||| || || || |||||| || || | || | | |||| || ||
Sbjct 45341 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGT-TGCCAAGGGCCACTAA 45399
Query 49787 TCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TA 49845
| | || || || || || ||||| ||||||| ||| ||||| || | ||
Sbjct 45400 GAGA-CGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTA 45458
Query 49846 AGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATA 49905
| | ||||||||| |||| || || || | |||||| || || || || ||
Sbjct 45459 AACCGCAA-GGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATG 45517
Query 49906 ATA-GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGC 49964
|| | || | ||| ||| | || || || | || |||| | || ||
Sbjct 45518 ATTTGCTCAACAAGTTCCTTGCCAGGGCGGTTGTTC-AGGTGGGAGAACAATAGGCAGGC 45576
Query 49965 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 50024
|| || |||||||||||| || | ||| || ||||| ||||| || || |||||
Sbjct 45577 AAAGTCAGTGTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGG 45636
Query 50025 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCC 50084
||| || |||||||| |||||||| || || ||||| | |||||||||||||| ||
Sbjct 45637 CATCAGACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCCAGAAAAGAAGATGCC 45696
Query 50085 TTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCA 50141
|| || || ||||| || | || | || || || | | | ||||| |||||
Sbjct 45697 CTCGACGGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATCCA 45756
Query 50142 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 50201
|| ||||||| ||||| || || || || || || || || || || || ||
Sbjct 45757 TTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAACAG 45816
Query 50202 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 50261
|| | | | || || | ||||||||||||||| | | || | || ||
Sbjct 45817 GTACGTGCGCTGGGCAGGCTCCTTGATATAAGTATCGATCAACAAAGAGTAGGTCTCGGA 45876
Query 50262 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 50321
|| ||||| || || ||||| || || ||||| || | |||||| | ||||| ||
Sbjct 45877 GTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGGAC 45936
Query 50322 TTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 50381
|| | | || || ||| | | || || || || || || ||| ||| ||||| ||
Sbjct 45937 CTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCATCAGAGGCAGCAAAGAA 45996
Query 50382 CGCCAATACATGTTTTATAA---AATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATT 50438
|||| | || || | | || | || |||| | || ||||| || |
Sbjct 45997 GGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAGTCGTG 46056
Query 50439 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 50498
|| |||||| |||| ||| | || || | ||||| || || ||||| ||||| |||||
Sbjct 46057 GAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTATA 46116
Query 50499 CATATTCCAGAT 50510
||| | ||||||
Sbjct 46117 CATCTGCCAGAT 46128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718260602757320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |