Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq425 165 1e-35 seq142 104 3e-17 >seq425 Length=119061 Score = 165 bits (182), Expect = 1e-35 Identities = 555/853 (65%), Gaps = 16/853 (2%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 || ||||| ||||| |||||||| |||||||| || ||||| || ||| || || || Sbjct 45281 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 45340 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATT--CAGAAA 41891 |||||||| || || || |||||| || || | || | | |||| || || Sbjct 45341 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGT-TGCCAAGGGCCACTAA 45399 Query 41892 TCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TA 41950 | | || || | ||| || ||||| ||||||| ||| ||||| || | || Sbjct 45400 GAGA-CGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTA 45458 Query 41951 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 42010 | | ||||||||| |||| || || || | ||||| ||| ||||| || || Sbjct 45459 AACCGCAA-GGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATG 45517 Query 42011 ATA-GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 42069 || | || ||| ||| | || || | | || |||| | || || Sbjct 45518 ATTTGCTCAACAAGTTCCTTGCCAGGGCGGTTGTTC-AGGTGGGAGAACAATAGGCAGGC 45576 Query 42070 GAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 42129 || || ||||||||||||||| | ||| | ||||| ||||| || || ||||| Sbjct 45577 AAAGTCAGTGTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGG 45636 Query 42130 CATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCC 42189 ||| || |||||||| |||||||| ||||| ||||| | ||||||||||||||| || Sbjct 45637 CATCAGACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCCAGAAAAGAAGATGCC 45696 Query 42190 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCCA 42246 || || || ||||| || || || | || || || | | ||||| ||||| Sbjct 45697 CTCGACGGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATCCA 45756 Query 42247 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306 || ||||||| ||||| || || || || || || || || || || || || Sbjct 45757 TTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAACAG 45816 Query 42307 ATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGA 42366 || | | | || || | ||| ||||||||||| | | || | || || Sbjct 45817 GTACGTGCGCTGGGCAGGCTCCTTGATATAAGTATCGATCAACAAAGAGTAGGTCTCGGA 45876 Query 42367 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTAC 42426 || ||||| || || ||||| || || ||||| || | ||||| | | ||| || Sbjct 45877 GTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGGAC 45936 Query 42427 TTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAA 42486 || | | || || ||| | | || ||||| || || || ||| ||| ||||| || Sbjct 45937 CTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCATCAGAGGCAGCAAAGAA 45996 Query 42487 CGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTTATTCCAATCAT 42542 |||| | || || || || | |||||| || ||| || ||||| || | Sbjct 45997 GGCCAGAATGTGAGAGATGAAGTACTGCTCGTCC-TTGGTAAGCCGGTTGTTCCAGTCGT 46055 Query 42543 TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTAT 42602 || |||||| |||| ||| | || || | ||||| || || || || ||||| |||| Sbjct 46056 GGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTAT 46115 Query 42603 ACATATTCCAGAT 42615 |||| | |||||| Sbjct 46116 ACATCTGCCAGAT 46128 >seq142 Length=98154 Score = 104 bits (114), Expect = 3e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848 |||| ||| | || ||||| ||||||| || ||||| | ||||| |||||||||||| Sbjct 3936 TCCTGGTCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATG 3877 Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908 || || || ||||| || |||| || ||| ||||| || || | |||| | || Sbjct 3876 CCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTA 3817 Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 ||||| ||||| || |||| |||||| ||||||||||| || || | || || Sbjct 3816 GGATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCG 3757 Query 70969 GCCATTT 70975 ||||||| Sbjct 3756 GCCATTT 3750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671131540623880