Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq425 165 1e-35
seq142 104 3e-17
>seq425
Length=119061
Score = 165 bits (182), Expect = 1e-35
Identities = 555/853 (65%), Gaps = 16/853 (2%)
Strand=Plus/Plus
Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833
|| ||||| ||||| |||||||| |||||||| || ||||| || ||| || || ||
Sbjct 45281 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 45340
Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATT--CAGAAA 41891
|||||||| || || || |||||| || || | || | | |||| || ||
Sbjct 45341 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGT-TGCCAAGGGCCACTAA 45399
Query 41892 TCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TA 41950
| | || || | ||| || ||||| ||||||| ||| ||||| || | ||
Sbjct 45400 GAGA-CGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTA 45458
Query 41951 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 42010
| | ||||||||| |||| || || || | ||||| ||| ||||| || ||
Sbjct 45459 AACCGCAA-GGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATG 45517
Query 42011 ATA-GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 42069
|| | || ||| ||| | || || | | || |||| | || ||
Sbjct 45518 ATTTGCTCAACAAGTTCCTTGCCAGGGCGGTTGTTC-AGGTGGGAGAACAATAGGCAGGC 45576
Query 42070 GAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 42129
|| || ||||||||||||||| | ||| | ||||| ||||| || || |||||
Sbjct 45577 AAAGTCAGTGTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGG 45636
Query 42130 CATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCC 42189
||| || |||||||| |||||||| ||||| ||||| | ||||||||||||||| ||
Sbjct 45637 CATCAGACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCCAGAAAAGAAGATGCC 45696
Query 42190 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCCA 42246
|| || || ||||| || || || | || || || | | ||||| |||||
Sbjct 45697 CTCGACGGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATCCA 45756
Query 42247 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306
|| ||||||| ||||| || || || || || || || || || || || ||
Sbjct 45757 TTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAACAG 45816
Query 42307 ATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGA 42366
|| | | | || || | ||| ||||||||||| | | || | || ||
Sbjct 45817 GTACGTGCGCTGGGCAGGCTCCTTGATATAAGTATCGATCAACAAAGAGTAGGTCTCGGA 45876
Query 42367 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTAC 42426
|| ||||| || || ||||| || || ||||| || | ||||| | | ||| ||
Sbjct 45877 GTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGGAC 45936
Query 42427 TTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAA 42486
|| | | || || ||| | | || ||||| || || || ||| ||| ||||| ||
Sbjct 45937 CTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCATCAGAGGCAGCAAAGAA 45996
Query 42487 CGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTTATTCCAATCAT 42542
|||| | || || || || | |||||| || ||| || ||||| || |
Sbjct 45997 GGCCAGAATGTGAGAGATGAAGTACTGCTCGTCC-TTGGTAAGCCGGTTGTTCCAGTCGT 46055
Query 42543 TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTAT 42602
|| |||||| |||| ||| | || || | ||||| || || || || ||||| ||||
Sbjct 46056 GGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTAT 46115
Query 42603 ACATATTCCAGAT 42615
|||| | ||||||
Sbjct 46116 ACATCTGCCAGAT 46128
>seq142
Length=98154
Score = 104 bits (114), Expect = 3e-17
Identities = 135/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848
|||| ||| | || ||||| ||||||| || ||||| | ||||| ||||||||||||
Sbjct 3936 TCCTGGTCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATG 3877
Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908
|| || || ||||| || |||| || ||| ||||| || || | |||| | ||
Sbjct 3876 CCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTA 3817
Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968
||||| ||||| || |||| |||||| ||||||||||| || || | || ||
Sbjct 3816 GGATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCG 3757
Query 70969 GCCATTT 70975
|||||||
Sbjct 3756 GCCATTT 3750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671131540623880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |