Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq425 168 1e-36
seq142 123 4e-23
seq83 87.8 3e-12
>seq425
Length=119061
Score = 168 bits (186), Expect = 1e-36
Identities = 386/572 (67%), Gaps = 12/572 (2%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | ||||| || |||||| ||||||| || ||||| | || ||| | |||||
Sbjct 46128 ATCTGGCAGATGTATAAGAAGGCTGAGGCCTCGTTCTGGACTGCTGAGGAGATTGATCTA 46069
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||| || || |||| ||| | | || | || | |||| | || || ||
Sbjct 46068 TCCAAAGATCTCCACGACTGGAACAACCGGCTTACCAAGGACGAGCAGTACTTCATCTCT 46009
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
|||||| ||||||||||||| | ||| ||||| || |||||||| || || ||||| ||
Sbjct 46008 CACATTCTGGCCTTCTTTGCTGCCTCTGATGGCATTGTCAACGAGAACCTGGTTGA-GCG 45950
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256
|||||| ||| | || || |||| ||| ||||| || || ||||| |||||||
Sbjct 45949 TTTCTCTGGCGAGGTCCAGATCCCTGAGG-CTCGTTGCTTCTATGGTTTCCAGATCATGA 45891
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA---TC 125313
| |||||| | ||||| || | |||||| |||| || | || || || |
Sbjct 45890 TGGAGAACATCCACTCCGAGACCTACTCTTTGTTGATCGATACTTATATCAAGGAGCCTG 45831
Query 125314 CGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373
| || || | || || || ||||| || ||||| | || | ||||| || |
Sbjct 45830 CCCAGCGCACGTAC---CTGTTCAACGCTATTGACACCATTCCCTGCATACGCCGCAAAG 45774
Query 125374 CTCAATGGGTGATTCGGTGGATCGATGAC-GACAAGTCTTCGTACGCCGACAGACTGGTG 125432
| | |||| | |||||| ||| || || || | | || | | || |
Sbjct 45773 CCGACTGGGCTCTCAAATGGATCTGCGACAGAGAA-TCAACTTTTGCTCAGCGCCTAATC 45715
Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492
|| || || ||||| ||||||||||||||||| || ||||| | |||||||||||
Sbjct 45714 GCTTTTGCTGCCGTCGAGGGCATCTTCTTTTCTGGAGCCTTTGCCTCTATCTTTTGGCTG 45655
Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552
||||| || || |||||||| ||||| ||||||| | || || || || |||
Sbjct 45654 CGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCCCGTGATGAG 45595
Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTT 125584
|| || ||| |||||||||| ||| ||||
Sbjct 45594 GGTCTGCACACTGACTTTGCCTGCCTATTGTT 45563
>seq142
Length=98154
Score = 123 bits (136), Expect = 4e-23
Identities = 298/446 (67%), Gaps = 4/446 (1%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || || || || | || ||||| | || || ||||| || ||
Sbjct 2531 CAGGGTGGCAACAAGCGCCCTGGAGCCTTTGCTATCTACCTAGAGCCGTGGCATGCCGAT 2590
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || |||| | ||||| ||| ||| || ||| || ||| | |||
Sbjct 2591 GTCTTCGAGTTCCTCGACCTACGCAAGAACCACGGCAAGGAGGAGATTCGTGCCCGCGAC 2650
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
|||| || || ||| | || || ||||||||||||| ||| | | | | ||
Sbjct 2651 CTGTTCCTAGCCCTGTGGATTCCCGACCTGTTCATGAAGCGTGTCGAGAAGAACGCCAAC 2710
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| || ||||||||| || || ||||||||| |||| |||| || || |||||
Sbjct 2711 TGGACACTCATGTGCCCCAACGAGTGCCCCGGTCTGGCCGACTGCTACGGTGACGAGTTC 2770
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174
||||| |||| |||||| |||||||| || || | || | || |
Sbjct 2771 GAGGCTCTGTACGAAAAGTACGAGAGCGAGGGCCGCGGTCGCCTCACCA-TCAAGGC-CC 2828
Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233
|||| || ||| | |||||| | ||| || ||||| |||| |||| ||| || |
Sbjct 2829 AGAAGCTATGGTACGCCATCCTTGAGGCCCAAACCGAGACCGGAAACCCGTTCATGCTGT 2888
Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293
|||||||| || || | || |||||||| || ||||||| || ||||||
Sbjct 2889 ACAAGGATGCCTGCAACAGGAAGAGCAACCAGAAGAACCTGGGCACTATTCGCAGCTCCA 2948
Query 97294 ATCTGTGCACGGAAATTGTAGAGTAC 97319
| |||||||| || || | ||||||
Sbjct 2949 ACCTGTGCACCGAGATCATCGAGTAC 2974
>seq83
Length=83120
Score = 87.8 bits (96), Expect = 3e-12
Identities = 159/225 (71%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126
|||||||| || || ||||| || ||||| ||| | || | ||| | | || || ||
Sbjct 80677 GGCGATCTAGGCCCTGTGTATGGCTTCCAATGGCGCCATTTCGGCGCGGAATACGTCGA- 80735
Query 70127 TGCG-AGACAGACTATTCGGGTCAGGGTGTTGATCAATT-GCAGACAATCATTGACACTC 70184
||| | || || ||| |||| ||||| || ||||| | ||||| |||| | | |
Sbjct 80736 TGCTCAAACGGATTATACGGGCCAGGGCGTCGATCAGCTCGCAGAGG-TCATCTATAAGC 80794
Query 70185 TCAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGC 70244
| ||||| || ||| ||| | | ||| | ||| || | ||||| ||||| ||| |
Sbjct 80795 TGAAGACTAACCCATATGATCGTCGCATCATCATGAGCGCGTGGAACCCTGCGGATCTCA 80854
Query 70245 ACCAAATGGCACTACCACCGTGTCAC-TGTTTGGCTCAGTTTTAC 70288
| | ||||| || || ||||||||| |||||| |||||||||||
Sbjct 80855 AGAAGATGGCGCTGCCGCCGTGTCACATGTTTG-CTCAGTTTTAC 80898
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741050742661880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |