Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq186 181 2e-41 seq638 109 9e-20 >seq186 Length=104209 Score = 181 bits (200), Expect = 2e-41 Identities = 203/269 (75%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| |||||| || || ||||| || ||||||||||| || | Sbjct 14719 CGCCAAGCGTCACCGCAAGAT-TCTTCGCGACAATATCCAGGGTATCACCAAGCCCGCCA 14777 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | |||||||| || ||||||||||| ||||||||| | |||| || | || || |||| Sbjct 14778 TTCGTCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATTTCTGCCATGATATACGAGGAGA 14837 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||| | |||| | ||| ||||||| || || |||| |||||| || ||| |||| Sbjct 14838 CTCGCGGTGTTCTCAAGTCCTTCCTCGAGGGTGTCATCCGTGATGCCGTCACCTACACCG 14897 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| |||||||| ||||| |||| || || | || | |||| Sbjct 14898 AGCACGCCAAGCGCAAGACCGTCACCTCGCTGGATGTCGTTTACGCCCTCAAGAGACAAG 14957 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | | || ||||| || ||||| Sbjct 14958 GCCGCACCCTGTACGGTTTCGGTGGTTAA 14986 >seq638 Length=24025 Score = 109 bits (120), Expect = 9e-20 Identities = 87/102 (85%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| |||||| || |||||||| || ||||||||||| |||| Sbjct 7580 CGCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTA 7638 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 | || ||||| |||||||||||||| ||||||||| | |||| Sbjct 7639 TTCGCCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 7680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074365237709