Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq425 174 2e-38
seq142 118 1e-21
>seq425
Length=119061
Score = 174 bits (192), Expect = 2e-38
Identities = 557/852 (65%), Gaps = 14/852 (2%)
Strand=Plus/Plus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
|| ||||| ||||| |||||||| |||||||| || || || || ||| || || ||
Sbjct 45281 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 45340
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATT--CAGAAA 33130
|||||||| || || || |||||| || || | || | | |||| || ||
Sbjct 45341 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGT-TGCCAAGGGCCACTAA 45399
Query 33131 TCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TA 33189
| | || || ||||| || ||||| ||||||| ||| ||||| || | ||
Sbjct 45400 GAGA-CGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTA 45458
Query 33190 AGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATA 33249
| | ||||||||| |||| || || || | |||||| || || || || ||
Sbjct 45459 AACCGCAA-GGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATG 45517
Query 33250 ATA-GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGC 33308
|| | || | ||| ||| | || || || | || |||| | || ||
Sbjct 45518 ATTTGCTCAACAAGTTCCTTGCCAGGGCGGTTGTTC-AGGTGGGAGAACAATAGGCAGGC 45576
Query 33309 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 33368
|| || |||||||||||| || | ||| || ||||| ||||| || || |||||
Sbjct 45577 AAAGTCAGTGTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGG 45636
Query 33369 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCC 33428
||| || |||||||| |||||||| || || || || | ||||||||||||||| ||
Sbjct 45637 CATCAGACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCCAGAAAAGAAGATGCC 45696
Query 33429 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA 33485
|| || |||||||| || || || | || || || | | ||||| |||||
Sbjct 45697 CTCGACGGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATCCA 45756
Query 33486 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33545
|| ||||||| ||||| || || || || || || || || || || || ||
Sbjct 45757 TTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAACAG 45816
Query 33546 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 33605
|| | | | || || | ||||||||||||||| | | || | || ||
Sbjct 45817 GTACGTGCGCTGGGCAGGCTCCTTGATATAAGTATCGATCAACAAAGAGTAGGTCTCGGA 45876
Query 33606 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 33665
|| ||||| || || ||||| || || ||||| || | |||||| | ||||| ||
Sbjct 45877 GTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGGAC 45936
Query 33666 TTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33725
|| | | || || || ||| || || || || || || ||| ||| ||||| ||
Sbjct 45937 CTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCATCAGAGGCAGCAAAGAA 45996
Query 33726 CGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGT-GTTAGTTTATTCCAATCATT 33782
|||| | || || || || | ||||| |||| | || ||||| || |
Sbjct 45997 GGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAGTCGTG 46056
Query 33783 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33842
|| |||||| |||| ||| | || || | ||||| || || ||||| ||||| |||||
Sbjct 46057 GAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTATA 46116
Query 33843 CATGTTCCAGAT 33854
||| | ||||||
Sbjct 46117 CATCTGCCAGAT 46128
>seq142
Length=98154
Score = 118 bits (130), Expect = 1e-21
Identities = 470/732 (64%), Gaps = 16/732 (2%)
Strand=Plus/Minus
Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197
||||||||||| || | | | ||| || || || || | || ||||| | | |
Sbjct 2772 TCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTC 2713
Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257
|| | ||| | || || || ||||| || || || |||||||| || |||| ||
Sbjct 2712 CAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAAC 2653
Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317
|| || | || | | ||||| || || ||||| || ||||||||| | |
Sbjct 2652 AGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAG 2593
Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377
| ||| | ||||||||| || | ||| || || | ||||||| || ||||| || |||
Sbjct 2592 ACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCC 2533
Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437
|| || | || | |||||||| || | || | || ||| || | || ||||||||
Sbjct 2532 TGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATAGGCACGATGCCGTTTGAC 2473
Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63497
| || || || || | || || || |||| || ||| | || ||
Sbjct 2472 GTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCCA 2413
Query 63498 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCT 63557
|| || || ||||| || ||||| | || || || | ||| || |||||||||||
Sbjct 2412 ATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCA 2353
Query 63558 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG---TGACGACTAGTT 63614
||||| ||||| |||||| | | || || || | ||| || || | ||
Sbjct 2352 ATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTGGGCCTG-CGGC--GTG 2296
Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGT-AAACCATTTTTCAGAAAGTAGATTGTA 63673
|| || || || | ||||| || ||||| || ||| || | | |||| |||||
Sbjct 2295 CCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAAAAGCTTACTGGACATGTAG-TTGTA 2237
Query 63674 CGTCTCAATAGCTGAGTCTATA---TC-CCATTGATGAATTCCTACTGCGACACGCATTA 63729
|||||| | | ||| | | || || | || || || || |||||||| |
Sbjct 2236 CGTCTCGAGCACACGGTCGACACGGTCGCCCCAG----ATACCGACGGCAACACGCATGA 2181
Query 63730 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63789
||||||||| || | || ||||||||| || | || | || || ||| ||||
Sbjct 2180 TCATGTGCTGCGGACGCTCGACGATCTTGCCGTCCAACTTGAGCAGATACGATCGCTCCA 2121
Query 63790 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 63849
| |||||||| ||||| || | ||| |||||| || ||||| | || | |||| |
Sbjct 2120 AGGTTTTAAAGCCAAAGTACTGGTAGTTAAAGTCACGATCGTACACGATGGCAGAGTCCA 2061
Query 63850 GTTTATCCTTAT 63861
| ||||||||
Sbjct 2060 ACTCATCCTTAT 2049
Score = 86.0 bits (94), Expect = 8e-12
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 61983 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62042
|||| ||| | ||||| || |||||||||| |||| | ||||| |||||||||||
Sbjct 3936 TCCTGGTCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATG 3877
Query 62043 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62102
|| || || ||||| || |||| || ||| ||||| || || | |||| |
Sbjct 3876 CCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTA 3817
Query 62103 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62162
|||||| || ||||| |||| || || ||||||||||| || || | || ||
Sbjct 3816 GGATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCG 3757
Query 62163 GCCATTT 62169
|||||||
Sbjct 3756 GCCATTT 3750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622940090615080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |