Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq425 174 2e-38 seq142 118 1e-21 >seq425 Length=119061 Score = 174 bits (192), Expect = 2e-38 Identities = 557/852 (65%), Gaps = 14/852 (2%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 || ||||| ||||| |||||||| |||||||| || || || || ||| || || || Sbjct 45281 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 45340 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATT--CAGAAA 33130 |||||||| || || || |||||| || || | || | | |||| || || Sbjct 45341 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGT-TGCCAAGGGCCACTAA 45399 Query 33131 TCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TA 33189 | | || || ||||| || ||||| ||||||| ||| ||||| || | || Sbjct 45400 GAGA-CGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTA 45458 Query 33190 AGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATA 33249 | | ||||||||| |||| || || || | |||||| || || || || || Sbjct 45459 AACCGCAA-GGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATG 45517 Query 33250 ATA-GATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGC 33308 || | || | ||| ||| | || || || | || |||| | || || Sbjct 45518 ATTTGCTCAACAAGTTCCTTGCCAGGGCGGTTGTTC-AGGTGGGAGAACAATAGGCAGGC 45576 Query 33309 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 33368 || || |||||||||||| || | ||| || ||||| ||||| || || ||||| Sbjct 45577 AAAGTCAGTGTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGG 45636 Query 33369 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCC 33428 ||| || |||||||| |||||||| || || || || | ||||||||||||||| || Sbjct 45637 CATCAGACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCCAGAAAAGAAGATGCC 45696 Query 33429 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA 33485 || || |||||||| || || || | || || || | | ||||| ||||| Sbjct 45697 CTCGACGGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATCCA 45756 Query 33486 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33545 || ||||||| ||||| || || || || || || || || || || || || Sbjct 45757 TTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAACAG 45816 Query 33546 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 33605 || | | | || || | ||||||||||||||| | | || | || || Sbjct 45817 GTACGTGCGCTGGGCAGGCTCCTTGATATAAGTATCGATCAACAAAGAGTAGGTCTCGGA 45876 Query 33606 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 33665 || ||||| || || ||||| || || ||||| || | |||||| | ||||| || Sbjct 45877 GTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGGAC 45936 Query 33666 TTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33725 || | | || || || ||| || || || || || || ||| ||| ||||| || Sbjct 45937 CTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCATCAGAGGCAGCAAAGAA 45996 Query 33726 CGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGT-GTTAGTTTATTCCAATCATT 33782 |||| | || || || || | ||||| |||| | || ||||| || | Sbjct 45997 GGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAGTCGTG 46056 Query 33783 GATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33842 || |||||| |||| ||| | || || | ||||| || || ||||| ||||| ||||| Sbjct 46057 GAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTATA 46116 Query 33843 CATGTTCCAGAT 33854 ||| | |||||| Sbjct 46117 CATCTGCCAGAT 46128 >seq142 Length=98154 Score = 118 bits (130), Expect = 1e-21 Identities = 470/732 (64%), Gaps = 16/732 (2%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 ||||||||||| || | | | ||| || || || || | || ||||| | | | Sbjct 2772 TCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTC 2713 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 || | ||| | || || || ||||| || || || |||||||| || |||| || Sbjct 2712 CAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAAC 2653 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 || || | || | | ||||| || || ||||| || ||||||||| | | Sbjct 2652 AGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAG 2593 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | ||| | ||||||||| || | ||| || || | ||||||| || ||||| || ||| Sbjct 2592 ACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCC 2533 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | || | |||||||| || | || | || ||| || | || |||||||| Sbjct 2532 TGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATAGGCACGATGCCGTTTGAC 2473 Query 63438 ATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63497 | || || || || | || || || |||| || ||| | || || Sbjct 2472 GTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCCA 2413 Query 63498 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCT 63557 || || || ||||| || ||||| | || || || | ||| || ||||||||||| Sbjct 2412 ATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCA 2353 Query 63558 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGG---TGACGACTAGTT 63614 ||||| ||||| |||||| | | || || || | ||| || || | || Sbjct 2352 ATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTGGGCCTG-CGGC--GTG 2296 Query 63615 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGT-AAACCATTTTTCAGAAAGTAGATTGTA 63673 || || || || | ||||| || ||||| || ||| || | | |||| ||||| Sbjct 2295 CCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAAAAGCTTACTGGACATGTAG-TTGTA 2237 Query 63674 CGTCTCAATAGCTGAGTCTATA---TC-CCATTGATGAATTCCTACTGCGACACGCATTA 63729 |||||| | | ||| | | || || | || || || || |||||||| | Sbjct 2236 CGTCTCGAGCACACGGTCGACACGGTCGCCCCAG----ATACCGACGGCAACACGCATGA 2181 Query 63730 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63789 ||||||||| || | || ||||||||| || | || | || || ||| |||| Sbjct 2180 TCATGTGCTGCGGACGCTCGACGATCTTGCCGTCCAACTTGAGCAGATACGATCGCTCCA 2121 Query 63790 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 63849 | |||||||| ||||| || | ||| |||||| || ||||| | || | |||| | Sbjct 2120 AGGTTTTAAAGCCAAAGTACTGGTAGTTAAAGTCACGATCGTACACGATGGCAGAGTCCA 2061 Query 63850 GTTTATCCTTAT 63861 | |||||||| Sbjct 2060 ACTCATCCTTAT 2049 Score = 86.0 bits (94), Expect = 8e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 61983 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62042 |||| ||| | ||||| || |||||||||| |||| | ||||| ||||||||||| Sbjct 3936 TCCTGGTCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATG 3877 Query 62043 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62102 || || || ||||| || |||| || ||| ||||| || || | |||| | Sbjct 3876 CCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTA 3817 Query 62103 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62162 |||||| || ||||| |||| || || ||||||||||| || || | || || Sbjct 3816 GGATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCG 3757 Query 62163 GCCATTT 62169 ||||||| Sbjct 3756 GCCATTT 3750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622940090615080