Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq142 372 8e-98 seq425 95.1 3e-14 >seq142 Length=98154 Score = 372 bits (412), Expect = 8e-98 Identities = 1022/1550 (66%), Gaps = 28/1550 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| |||||| | || || ||| ||| ||||| || | | | ||| | || || Sbjct 2261 TTCACACACGCCTCACCTACGCTGTTCAACGCTGGCACGCCGCAGGCCCAGCTATCGTCA 2320 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| | | | |||||||| || ||| |||||||||| || || || |||| | Sbjct 2321 TGCTTCTTGGTCGACATGAAGGATGACAGCATTGAGGGTATCTACGATACGCTGAAGACT 2380 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 |||||| | || ||||||| || || || ||||| | | || ||||| | | || || Sbjct 2381 TGTGCTATGATCTCCAAGATGGCCGGTGGTATTGGCCTGAACG-TCCACCGTATCCGCGC 2439 Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | || ||||| ||||| || || || || | || || ||||| | Sbjct 2440 CACCGGCTCGT-ACATTGCTGGCACTAACGGCACGTCAAACGGCATCGTGCCTATGCTGC 2498 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 | || || |||| || || | || || ||||||||||| |||||| || || | Sbjct 2499 GCGTCTTCAACAACACCGCCCGCTATGTTGACCAGGGTGGCAACAAGCGCCCTGGAGCCT 2558 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 ||||||| || || ||||| ||||||||| | || ||||| || || || || || | Sbjct 2559 TTGCTATCTACCTAGAGCCGTGGCATGCCGATGTCTTCGAGTTCCTCGACCTACGCAAGA 2618 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || || ||||| | ||||| || || |||||| || || ||| || | |||| Sbjct 2619 ACCACGGCAAGGAGGAGATTCGTGCCCGCGACCTGTTCCTAGCCCTGTGGATTCCCGACC 2678 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATG 364022 || |||||||| || ||| | | | | || ||| ||||| | ||||| |||| || Sbjct 2679 TGTTCATGAAGCGTGTCGAG--AAGAACGCCAACTGGACACTCATGTGCCCCAACGAGTG 2736 Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATC 364082 || ||||| |||| | |||||||| | | ||||| ||||||||||| || Sbjct 2737 CCCCGGTCTGGCCGACTGCTACGGTGACGAGTTCGAGGCTCTGTACGAAAAGTACGAGAG 2796 Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 ||||| | ||| || || || ||||||||||||| |||||| | || | Sbjct 2797 CGAGGGCCGCGGTCGCCTCACCATCAAGGCCCAGAAGCTATGGTACGCCATCCTTGAGGC 2856 Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 || | ||||| |||| || | ||| ||||||| ||| | |||||| | ||| ||| Sbjct 2857 CCAAACCGAGACCGGAAACCCGTTCATGCTGTACAAGGATGCCTGCAACAGGAAGAGCAA 2916 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACA 364261 |||| || |||| || || |||| |||| |||||| || |||||||| || || ||| Sbjct 2917 CCAGAAGAACCTGGGCACTATTC-GCAGCTCCAACCTGTGCACCGAGATCATCGAGTACT 2975 Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT-- 364319 ||| || || || ||| || || ||||| || ||| | || || ||| ||||||| Sbjct 2976 GCGCCCCTGATGAAGTTGCTGTGTGCAACCTGGCCTCGCTGGCCCTACCGTCGTTTGTCG 3035 Query 364320 ----AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTAC 364373 || | || | |||| |||| | || | || | ||| | || | | | Sbjct 3036 ATTACAACAAGGGCGAGTATGACTTCCAGAAGCTGCACGAGATCACCAAGGTCGTCGTGC 3095 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433 |||| || || | |||||| ||||||||||| | || || || | Sbjct 3096 --GCAACCTGAACCGCATCATCGACGTCAATTATTATCCCGTGCCCGAGGCTCATAACAG 3153 Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493 |||||||| || ||||| ||||| ||||||| ||||| || || || | || | Sbjct 3154 CAATATGCGCCACCGCCCTATTGGAGTTGGTGTTCAGGGTCTAGCCGATGCCTTCCT--A 3211 Query 364494 GCTCAA--GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAA 364551 |||| | ||| | ||||| || | || || || || |||||| |||| || || Sbjct 3212 GCTCTACGCATGCCCTTTGAGTCTGCCGAGGCCCGCACGCTGAATAAGCAGATTTTCGAG 3271 Query 364552 ACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTAC 364611 || || || ||||| | ||||| ||||| || | || | ||| | || | ||| Sbjct 3272 ACCATCTACCACGCCGCCCTAACTGCCTCGTGCGAGATTGCTCAGACCGAAGGCACCTAC 3331 Query 364612 TCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTC 364671 || || |||||||| || ||| ||||||| || | | ||||| || | ||||||||| Sbjct 3332 TCGACCTATGAGGGCTCTCCTGTTTCGCAAGGCATTCTGCAGTTCGACATGTGGAATGTC 3391 Query 364672 ACGCCATCTGTCCGATGGAACTGGGATACGCT--ACGTTCCAACGTTAAGAAGCATGGTA 364729 || || | || ||| |||||| |||| | | | | | ||| |||| ||| Sbjct 3392 ACCCCCAGCGACCTGTGGGACTGGGCCTCGCTCAAAGAAC--AGATCAAGCAGCACGGTG 3449 Query 364730 CTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAA 364789 || ||||| || | ||| |||||||| || ||||| || | || ||||| || | Sbjct 3450 TGCGAAACTCGCTGCTCCTAGCCCCCATGCCGACTGCTTCGACCTCTCAAATCCTGGGCA 3509 Query 364790 ACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAG 364849 |||||||||||||||| || | || ||| | || ||| || || | | || | Sbjct 3510 ACAACGAGTGCTTCGAGCCCTACACTTCCAACATCTACCAACGTCGTGTGTTGGCTGGCG 3569 Query 364850 AATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTG 364909 | || | ||| || || | || | || || ||||| ||| || ||| | Sbjct 3570 AGTTCCAGGTCGTCAACCCCTGGCTGCTACGTGACCTAGTCGACCTCGGTCTTTGGTCCG 3629 Query 364910 ACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTC 364969 | |||||||||| |||||| || || ||||| | ||||||||||| | | | Sbjct 3630 ATGCCATGAAGAACCGCATCATCAGCGACAACGGTTCGATTCAGAACATTCCCAGTATCC 3689 Query 364970 CAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTG 365029 | | || | ||| | | ||||| || || |||||||| ||| ||| || | | Sbjct 3690 CTGCCGACATCAAGGCCTTGTACAAGACTGTTTGGGAAATCTCCCAGCGCACCGTTGTGC 3749 Query 365030 ATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAAC 365079 | ||||| |||||||| || ||||| ||| |||| |||||| | ||| Sbjct 3750 AAATGGCCGCCGATCGTGGCGCTTTCATCGATCAGTCGCAGTCGCTGAAC 3799 >seq425 Length=119061 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/206 (70%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 22441 AAGGCAGATTGGGCGCTGAAATGGATGA---ACAATGAACGTTCATTCGCGGAACGTCTT 22497 || || || ||||| || |||||||| ||| ||| | || || | || || Sbjct 45777 AAAGCCGACTGGGCTCTCAAATGGATCTGCGACAGAGAATCAACTTTTGCTCAGCGCCTA 45718 Query 22498 ATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGG 22557 || || ||||||| || || ||||| |||||||||||||| ||| | ||||||||| Sbjct 45717 ATCGCTTTTGCTGCCGTCGAGGGCATCTTCTTTTCTGGAGCCTTTGCCTCTATCTTTTGG 45658 Query 22558 CTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGAT 22617 || || |||| | ||||| || || || ||||| || ||| | ||| ||| ||| Sbjct 45657 CTGCGCAAGCGTGGTCTGATGCCCGGCCTGACCTTTTCTAACGAGCTGATTTCCCGTGAT 45598 Query 22618 GAGGGTCTTCATACCGATTTTGCGTG 22643 |||||||| || || || ||||| || Sbjct 45597 GAGGGTCTGCACACTGACTTTGCCTG 45572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303338353613966