Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq60 131 1e-25
seq198 122 6e-23
>seq60
Length=7889
Score = 131 bits (144), Expect = 1e-25
Identities = 86/95 (91%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||||||||||||||||||||||||||||||| |||||||||| || ||||||||
Sbjct 5431 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGATAGGGACAGTGGGAATCTCGT 5372
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||||||||||||||||||||||||||
Sbjct 5371 TGATCCATTCATGCGCGTCACTAATTAGATGACGA 5337
>seq198
Length=92858
Score = 122 bits (134), Expect = 6e-23
Identities = 218/314 (69%), Gaps = 6/314 (2%)
Strand=Plus/Minus
Query 6174 AACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCG-- 6231
||||| || | |||| | ||| ||||||||| ||||||||||| || ||| |
Sbjct 12374 AACGTCAACCCCGATGTTACCGACCAGTTCTACCGTTACAAAATGCCCCG--TCTTCAAA 12317
Query 6232 CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCG 6291
| ||| |||||||||| || || ||||| || || |||||||||||| || ||| ||||
Sbjct 12316 CTAAGATCGAGGGTAAAGGTAATGGTATCAAGACTGTCATTGTCAACCTGTCTGCCGTCG 12257
Query 6292 CTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCG 6351
| || |||| | ||||||| | ||| || || || ||||| | ||| || || |
Sbjct 12256 CCCAGTCGCTGGCTCGCCCTGGTGCTCACCTGATCAAGTACTTCGGTTTCGAGCTGGGTG 12197
Query 6352 CTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTG 6411
| ||||| | |||| | | || |||| ||| | ||||| || ||| || |
Sbjct 12196 CCCAGACCAATATTGACCCTCCGGATGATCGCTGGATCATCAACGGTTCACATGACACAA 12137
Query 6412 CCAAGCTGCAGGACTTAC-TTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGC 6470
||| ||||||| | || | ||||||| ||| ||||||||| || || | | |||
Sbjct 12136 AGAAGTTGCAGGA-TCACGTCTACGGCTTCATTGTCAAGTTTGTTCTCTGCAAGAAGTGC 12078
Query 6471 GATAACCCGGAGAC 6484
| ||||| |||||
Sbjct 12077 AAGAACCCCGAGAC 12064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334943472979703
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |