Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq60 131 1e-25 seq198 122 6e-23 >seq60 Length=7889 Score = 131 bits (144), Expect = 1e-25 Identities = 86/95 (91%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||||||||||||||||||| |||||||||| || |||||||| Sbjct 5431 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATGGTAGATAGGGACAGTGGGAATCTCGT 5372 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| |||||||||||||||||||||||||||| Sbjct 5371 TGATCCATTCATGCGCGTCACTAATTAGATGACGA 5337 >seq198 Length=92858 Score = 122 bits (134), Expect = 6e-23 Identities = 218/314 (69%), Gaps = 6/314 (2%) Strand=Plus/Minus Query 6174 AACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCG-- 6231 ||||| || | |||| | ||| ||||||||| ||||||||||| || ||| | Sbjct 12374 AACGTCAACCCCGATGTTACCGACCAGTTCTACCGTTACAAAATGCCCCG--TCTTCAAA 12317 Query 6232 CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCG 6291 | ||| |||||||||| || || ||||| || || |||||||||||| || ||| |||| Sbjct 12316 CTAAGATCGAGGGTAAAGGTAATGGTATCAAGACTGTCATTGTCAACCTGTCTGCCGTCG 12257 Query 6292 CTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCG 6351 | || |||| | ||||||| | ||| || || || ||||| | ||| || || | Sbjct 12256 CCCAGTCGCTGGCTCGCCCTGGTGCTCACCTGATCAAGTACTTCGGTTTCGAGCTGGGTG 12197 Query 6352 CTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTG 6411 | ||||| | |||| | | || |||| ||| | ||||| || ||| || | Sbjct 12196 CCCAGACCAATATTGACCCTCCGGATGATCGCTGGATCATCAACGGTTCACATGACACAA 12137 Query 6412 CCAAGCTGCAGGACTTAC-TTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGC 6470 ||| ||||||| | || | ||||||| ||| ||||||||| || || | | ||| Sbjct 12136 AGAAGTTGCAGGA-TCACGTCTACGGCTTCATTGTCAAGTTTGTTCTCTGCAAGAAGTGC 12078 Query 6471 GATAACCCGGAGAC 6484 | ||||| ||||| Sbjct 12077 AAGAACCCCGAGAC 12064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943472979703