Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq425 143 3e-29 seq142 118 1e-21 >seq425 Length=119061 Score = 143 bits (158), Expect = 3e-29 Identities = 550/852 (65%), Gaps = 14/852 (2%) Strand=Plus/Plus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 || ||||| ||||| |||||||| |||||||| || || || || | | || || || Sbjct 45281 TTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTC 45340 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATT--CAGAAA 32487 |||||||| ||||| || |||||| || || | || | | |||| || || Sbjct 45341 TCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGT-TGCCAAGGGCCACTAA 45399 Query 32488 TCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA-TA 32546 | | || || || || || ||||| ||||||| ||| ||||| || | || Sbjct 45400 GAGA-CGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTA 45458 Query 32547 AGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATA 32606 | | ||||||||| |||| || || || | ||||| ||| ||||| || || Sbjct 45459 AACCGCAA-GGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATG 45517 Query 32607 ATA-GATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 32665 || | || ||| ||| | || || | | || |||| | || || Sbjct 45518 ATTTGCTCAACAAGTTCCTTGCCAGGGCGGTTGTTC-AGGTGGGAGAACAATAGGCAGGC 45576 Query 32666 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 32725 || || ||| |||||||| || | ||| | ||||| ||||| || || ||||| Sbjct 45577 AAAGTCAGTGTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGG 45636 Query 32726 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 32785 ||| || |||||||| |||||||| || || ||||| | |||||||||||| || || Sbjct 45637 CATCAGACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCCAGAAAAGAAGATGCC 45696 Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA 32842 || || || ||||| || || || | || || || | | ||||| ||||| Sbjct 45697 CTCGACGGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATCCA 45756 Query 32843 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902 || ||||||| ||||| || || || || || || || ||||| || || || Sbjct 45757 TTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAACAG 45816 Query 32903 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 32962 || | | | || || | ||| ||||| ||||| | | || | || || Sbjct 45817 GTACGTGCGCTGGGCAGGCTCCTTGATATAAGTATCGATCAACAAAGAGTAGGTCTCGGA 45876 Query 32963 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTAC 33022 || ||||| || || || || || || |||||||| | |||||| | ||||| || Sbjct 45877 GTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGGAC 45936 Query 33023 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33082 || | | || || || | | || || || || || || ||| ||| ||||| || Sbjct 45937 CTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCATCAGAGGCAGCAAAGAA 45996 Query 33083 CGCCAATACATGTTTTATAAAATATTTTTCGTC--TGGT-GTTAGTTTATTCCAATCATT 33139 |||| | || || || || | ||||| |||| | || ||||| || | Sbjct 45997 GGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAGTCGTG 46056 Query 33140 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33199 || |||||| |||| ||| | || || | ||||| || || ||||| ||||| ||||| Sbjct 46057 GAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTATA 46116 Query 33200 CATATTCCAGAT 33211 ||| | |||||| Sbjct 46117 CATCTGCCAGAT 46128 >seq142 Length=98154 Score = 118 bits (130), Expect = 1e-21 Identities = 470/732 (64%), Gaps = 16/732 (2%) Strand=Plus/Minus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 ||||||||||| || | | | |||| || || || || | || ||||| | | | Sbjct 2772 TCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCACTCGTTGGGGCACATGAGTGTC 2713 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 || | ||| | || || || ||||| || || || |||||||| || |||| || Sbjct 2712 CAGTTGGCGTTCTTCTCGACACGCTTCATGAACAGGTCGGGAATCCACAGGGCTAGGAAC 2653 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 || || | || | | ||||| || || ||||| || ||||||||| | | Sbjct 2652 AGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGTAGGTCGAGGAACTCGAAG 2593 Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63232 | ||| | ||||||||| || | ||| || || | ||||||| || ||||| || ||| Sbjct 2592 ACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAGGCTCCAGGGCGCTTGTTGCCACCC 2533 Query 63233 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 63292 || || | || | |||||||| || | || | || ||| || | || || || || Sbjct 2532 TGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGCAGCATAGGCACGATGCCGTTTGAC 2473 Query 63293 GTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCT 63352 || || || || || | || || || |||| || ||| | || || Sbjct 2472 GTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCGCGGATACGGTGGACGTTCAGGCCA 2413 Query 63353 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 63412 || || || ||||| || ||||| | || || || | |||||| ||||| ||||| Sbjct 2412 ATACCACCGGCCATCTTGGAGATCATAGCACAAGTCTTCAGCGTATCGTAGATACCCTCA 2353 Query 63413 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG---TGACGACTAGTT 63469 || || |||||| |||||| | | || || || | ||| || || | || Sbjct 2352 ATGCTGTCATCCTTCATGTCGACCAAGAAGCATGACGATAGCTGGGCCTG-CGGC--GTG 2296 Query 63470 CCCGCATTAAATAAGGTAGGAGAAGCGTGAGT-AAACCATTTTTCAGAAAGTAGATTGTA 63528 || || || || | ||||| || ||||| || ||| || | | |||| ||||| Sbjct 2295 CCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAAAAGCTTACTGGACATGTAG-TTGTA 2237 Query 63529 CGTCTCAATAGCTGAGTCTATA---TC-CCATTGATGAATTCCTACTGCGACACGCATTA 63584 |||||| | | ||| | | || || | || || || || |||||||| | Sbjct 2236 CGTCTCGAGCACACGGTCGACACGGTCGCCCCAG----ATACCGACGGCAACACGCATGA 2181 Query 63585 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCA 63644 ||||||||| || | || ||||||||| || | || | || || ||| |||| Sbjct 2180 TCATGTGCTGCGGACGCTCGACGATCTTGCCGTCCAACTTGAGCAGATACGATCGCTCCA 2121 Query 63645 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGA 63704 | |||||||| ||||| || | ||| |||||| || ||||| | || | |||| | Sbjct 2120 AGGTTTTAAAGCCAAAGTACTGGTAGTTAAAGTCACGATCGTACACGATGGCAGAGTCCA 2061 Query 63705 GTTTATCCTTAT 63716 | |||||||| Sbjct 2060 ACTCATCCTTAT 2049 Score = 89.7 bits (98), Expect = 7e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 61838 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 61897 |||| ||| | ||||| || |||||||||| |||| | ||||| ||||||||||| Sbjct 3936 TCCTGGTCAACAGTGAACTGGATGGGAGCGGCGGCGGCCTGGGTACGCAGATAGTACATG 3877 Query 61898 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 61957 || || || ||||| || |||| || ||| ||||| || || | |||| | Sbjct 3876 CCAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTA 3817 Query 61958 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62017 |||||| || ||||| |||| || || ||||||||||| || || | || || Sbjct 3816 GGATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAAGCGCCACGATCGGCG 3757 Query 62018 GCCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA 62064 ||||||| | || || || | |||||||||| ||| || || Sbjct 3756 GCCATTTGCACAACGGTGCGCTGGGAGATTTCCCAAACAGTCTTGTA 3710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633624768674800