Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq366 170 2e-37 seq142 91.5 1e-13 seq24 82.4 6e-11 >seq366 Length=80546 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | || || ||||| |||| ||||| || || | | Sbjct 27550 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 27491 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || ||||| || |||||||| ||||||||||| || || ||||| Sbjct 27490 GATACTATTGACAATGTCAAATCGAAGATTCAAGATAAGGAGGGTATCCCTCCGGATCAG 27431 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || ||||||||||| ||| | |||||| ||| ||| ||||||| |||||| Sbjct 27430 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 27371 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 |||||||| || || ||| ||||| | ||| |||| |||| ||||| Sbjct 27370 ATTCAAAAGGAGTCTACCCTACATCTGGTTCTGCGTCTGCGTGGAGG 27324 Score = 95.1 bits (104), Expect = 1e-14 Identities = 126/175 (72%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 22241 TAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAAC 22300 ||||||| || || ||||||| || || || | |||| ||| | ||| || |||| Sbjct 28125 TAACCGGCAAGACCATCACTCTCGAGGTCGAGTCTTCCGACACCATCGACAATGTCAAGT 28066 Query 22301 AAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCA 22360 || ||||| || |||||||||||||| || || || || ||||| || || ||||| | Sbjct 28065 CGAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAGCAGCGTCTAATTTTCGCCGGAA 28006 Query 22361 AACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 | || | ||||| |||||| | ||||| ||||| || || || || || || Sbjct 28005 AGCAACTTGAGGACGGTCGCACCCTGTCCGACTACAATATCCAGAAGGAGTCTAC 27951 >seq142 Length=98154 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/213 (70%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 129133 ACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAAC 129192 || || || || || ||||| || || || ||| |||||| ||| | ||||| || Sbjct 3579 ACCTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAG 3520 Query 129193 GATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGC 129252 | || |||||||| | ||||||| || | || || |||||| || | | ||| Sbjct 3519 CACTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTCGGCATGGGGGCTAGGAGCAGC 3460 Query 129253 GAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACA--TCG 129310 |||||||||| ||||||||| || || | || ||| | | ||||||||||| ||| Sbjct 3459 GAGTTTCGCACACCGTGCTGCTTGATCTGTTCTTTGAGCGAGGCCCAGTCCCACAGGTCG 3400 Query 129311 ATGTGGGTGTGTGATTCCACAAGTCGTATTGCA 129343 |||| ||| |||||||| |||| | |||| Sbjct 3399 --CTGGGGGTGACATTCCACATGTCGAACTGCA 3369 >seq24 Length=141979 Score = 82.4 bits (90), Expect = 6e-11 Identities = 126/180 (70%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || || | || || | Sbjct 81088 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGAT 81147 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| || || |||||||||||||| ||||| || || ||||| || || Sbjct 81148 CGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCT 81207 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || || ||||| ||| | |||||| |||||| | || || |||||||| || || Sbjct 81208 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTTTGTCTGACTACAACATCCAGAA 81267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419723329607845