Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq366 170 2e-37
seq142 91.5 1e-13
seq24 82.4 6e-11
>seq366
Length=80546
Score = 170 bits (188), Expect = 2e-37
Identities = 174/227 (77%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || || ||| | || || ||||| |||| ||||| || || | |
Sbjct 27550 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 27491
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || ||||| || |||||||| ||||||||||| || || |||||
Sbjct 27490 GATACTATTGACAATGTCAAATCGAAGATTCAAGATAAGGAGGGTATCCCTCCGGATCAG 27431
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||||||||| ||| | |||||| ||| ||| ||||||| ||||||
Sbjct 27430 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 27371
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
|||||||| || || ||| ||||| | ||| |||| |||| |||||
Sbjct 27370 ATTCAAAAGGAGTCTACCCTACATCTGGTTCTGCGTCTGCGTGGAGG 27324
Score = 95.1 bits (104), Expect = 1e-14
Identities = 126/175 (72%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 22241 TAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAAC 22300
||||||| || || ||||||| || || || | |||| ||| | ||| || ||||
Sbjct 28125 TAACCGGCAAGACCATCACTCTCGAGGTCGAGTCTTCCGACACCATCGACAATGTCAAGT 28066
Query 22301 AAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCA 22360
|| ||||| || |||||||||||||| || || || || ||||| || || ||||| |
Sbjct 28065 CGAAGATTCAGGATAAGGAGGGTATTCCCCCAGACCAGCAGCGTCTAATTTTCGCCGGAA 28006
Query 22361 AACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
| || | ||||| |||||| | ||||| ||||| || || || || || ||
Sbjct 28005 AGCAACTTGAGGACGGTCGCACCCTGTCCGACTACAATATCCAGAAGGAGTCTAC 27951
>seq142
Length=98154
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/213 (70%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 129133 ACTTGAAAGTCACCCGCCAAAACGCGCCGAACGTAAATGTTGTTGGTGAACGGCTCAAAC 129192
|| || || || || ||||| || || || ||| |||||| ||| | ||||| ||
Sbjct 3579 ACCTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAG 3520
Query 129193 GATTCATTGTTGCCTAATATTTGAGCCGTTGTCGCGGTGGGCATGTAAGCCACGCAAAGC 129252
| || |||||||| | ||||||| || | || || |||||| || | | |||
Sbjct 3519 CACTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTCGGCATGGGGGCTAGGAGCAGC 3460
Query 129253 GAGTTTCGCAAACCGTGCTGTTTAATGTCtttttttAATTGTGTCCAGTCCCACA--TCG 129310
|||||||||| ||||||||| || || | || ||| | | ||||||||||| |||
Sbjct 3459 GAGTTTCGCACACCGTGCTGCTTGATCTGTTCTTTGAGCGAGGCCCAGTCCCACAGGTCG 3400
Query 129311 ATGTGGGTGTGTGATTCCACAAGTCGTATTGCA 129343
|||| ||| |||||||| |||| | ||||
Sbjct 3399 --CTGGGGGTGACATTCCACATGTCGAACTGCA 3369
>seq24
Length=141979
Score = 82.4 bits (90), Expect = 6e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || ||||| || | || || || || || || | || || |
Sbjct 81088 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGAT 81147
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| | |||| || || |||||||||||||| ||||| || || ||||| || ||
Sbjct 81148 CGACAACGTCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCT 81207
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || || ||||| ||| | |||||| |||||| | || || |||||||| || ||
Sbjct 81208 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTTTGTCTGACTACAACATCCAGAA 81267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419723329607845
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |