Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq425 150 4e-31
seq6 129 1e-24
seq492 98.7 2e-15
>seq425
Length=119061
Score = 150 bits (166), Expect = 4e-31
Identities = 276/403 (68%), Gaps = 10/403 (2%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
||||| || || | ||||||| ||||||| || ||||||||||||||||||||| ||
Sbjct 45305 TCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTA 45364
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
||| |||| |||| | |||||| || || |||| ||||| || || ||||| | |
Sbjct 45365 GCACGGTACACCTTGTCGTTGCCAAGGGCCACTAAGAGACGGTCGGCAACGAACTCAATA 45424
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| |||||| |||| ||||||||| | | || ||||||| |||||| | |
Sbjct 45425 TACTGCTTCATCAGGTCAGCGTTCATGCCGAGTAAACCGCAAGGAAGAGCCTCAGTCAGG 45484
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC-----CTGTGCCAGAG 251797
|| ||||| || || | || || || | ||| || || | |||||| |
Sbjct 45485 AACTCCTTCTCAATGACGACGGCGTCGGTGATGATTTGCTCAACAAGTTCCTTGCCAGGG 45544
Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857
| ||||| ||| | ||| ||| || | |||| | |||||||||||| |
Sbjct 45545 --CGGTTGTT---CAGGTGGGAGAACAATAGGCAGGCAAAGTCAGTGTGCAGACCCTCAT 45599
Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917
| || || | |||||| || | |||||| ||||||| ||||| || | ||||
Sbjct 45600 CACGGGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGGCATCAGACCACGCTTGCGCAGCC 45659
Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960
| ||||| | | ||||| |||||| || | | ||||||||
Sbjct 45660 AAAAGATAGAGGCAAAGGCTCCAGAAAAGAAGATGCCCTCGAC 45702
>seq6
Length=117836
Score = 129 bits (142), Expect = 1e-24
Identities = 176/243 (72%), Gaps = 2/243 (1%)
Strand=Plus/Plus
Query 279324 GCAGAGAAGGAGACTGAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATAT 279383
|| ||| |||| |||| ||||||||||||||| |||| |||||| ||||| ||
Sbjct 45569 GCTGAGGAGGATGATGAGGAAGGTGAGGATCTGTGCAACTGCACTTTCTCTCTCGCCTAC 45628
Query 279384 GGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGT 279443
|||| |||||||| || ||| |||| ||| | ||||||||| | || || |||
Sbjct 45629 GGTGCTAAGATTCTTCTCAACCAGACCCACCTGCGTCTAAAGCGTGGCCAGCGCTACGGT 45688
Query 279444 CTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAG 279503
|| |||||| || || | || ||| ||||| ||||| ||||| |||| |||
Sbjct 45689 CTTTGCGGTCCAAACGGTTCTGGAAAGTCTACTCTCATGCGTGCCATCAACAACGAGCAG 45748
Query 279504 CTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGA 279562
| || ||||||||||| ||| |||||||| | ||| || | || ||||||||| | ||
Sbjct 45749 GTTGAGGGATTTCCTAA-GCAGTCTGAGGTCAAGACCGTCTTCGTCGAGCACGACCTGGA 45807
Query 279563 CTC 279565
|||
Sbjct 45808 CTC 45810
>seq492
Length=112588
Score = 98.7 bits (108), Expect = 2e-15
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 279689 TCTGCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCAT 279748
|| ||| || || || |||| |||||||||||||||||||| ||||| |||| || ||
Sbjct 90456 TCAGCCTGTTGGCTCATTGTCCGGTGGTTGGAAGATGAAGCTAGCCCTTGCTCGTGCTAT 90397
Query 279749 TCTACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAA 279808
|||| | || ||||| || |||||||| || || ||||| || |||| ||||
Sbjct 90396 GCTACAGAAGGCTGATGTTCTTCTGCTTGACGAACCTACCAATCATTTGGATGTTGCCAA 90337
Query 279809 CGTAGCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTC 279868
|| ||||||| | ||| ||| || | | | | || || ||||| ||
Sbjct 90336 TGTGAAGTGGCTAGAAACTTACTTAAAGAGCCACCCCGACATCACCTCACTGATTGTTTC 90277
Query 279869 TCACGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAG 279920
|||||||||||| ||| | |||| || | ||| |||| |||||| |||
Sbjct 90276 TCACGACTCTGGTTTCTTGGATGAGGTAACCACTGACATCTATCACTACGAG 90225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027824776557833
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |