Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq425 150 4e-31 seq6 129 1e-24 seq492 98.7 2e-15 >seq425 Length=119061 Score = 150 bits (166), Expect = 4e-31 Identities = 276/403 (68%), Gaps = 10/403 (2%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 ||||| || || | ||||||| ||||||| || ||||||||||||||||||||| || Sbjct 45305 TCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTCTCCATGAAGTCGAAGGGGTTGGTA 45364 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 ||| |||| |||| | |||||| || || |||| ||||| || || ||||| | | Sbjct 45365 GCACGGTACACCTTGTCGTTGCCAAGGGCCACTAAGAGACGGTCGGCAACGAACTCAATA 45424 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| |||||| |||| ||||||||| | | || ||||||| |||||| | | Sbjct 45425 TACTGCTTCATCAGGTCAGCGTTCATGCCGAGTAAACCGCAAGGAAGAGCCTCAGTCAGG 45484 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC-----CTGTGCCAGAG 251797 || ||||| || || | || || || | ||| || || | |||||| | Sbjct 45485 AACTCCTTCTCAATGACGACGGCGTCGGTGATGATTTGCTCAACAAGTTCCTTGCCAGGG 45544 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857 | ||||| ||| | ||| ||| || | |||| | |||||||||||| | Sbjct 45545 --CGGTTGTT---CAGGTGGGAGAACAATAGGCAGGCAAAGTCAGTGTGCAGACCCTCAT 45599 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | || || | |||||| || | |||||| ||||||| ||||| || | |||| Sbjct 45600 CACGGGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGGCATCAGACCACGCTTGCGCAGCC 45659 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960 | ||||| | | ||||| |||||| || | | |||||||| Sbjct 45660 AAAAGATAGAGGCAAAGGCTCCAGAAAAGAAGATGCCCTCGAC 45702 >seq6 Length=117836 Score = 129 bits (142), Expect = 1e-24 Identities = 176/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 279324 GCAGAGAAGGAGACTGAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATAT 279383 || ||| |||| |||| ||||||||||||||| |||| |||||| ||||| || Sbjct 45569 GCTGAGGAGGATGATGAGGAAGGTGAGGATCTGTGCAACTGCACTTTCTCTCTCGCCTAC 45628 Query 279384 GGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGT 279443 |||| |||||||| || ||| |||| ||| | ||||||||| | || || ||| Sbjct 45629 GGTGCTAAGATTCTTCTCAACCAGACCCACCTGCGTCTAAAGCGTGGCCAGCGCTACGGT 45688 Query 279444 CTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAG 279503 || |||||| || || | || ||| ||||| ||||| ||||| |||| ||| Sbjct 45689 CTTTGCGGTCCAAACGGTTCTGGAAAGTCTACTCTCATGCGTGCCATCAACAACGAGCAG 45748 Query 279504 CTGGAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGA 279562 | || ||||||||||| ||| |||||||| | ||| || | || ||||||||| | || Sbjct 45749 GTTGAGGGATTTCCTAA-GCAGTCTGAGGTCAAGACCGTCTTCGTCGAGCACGACCTGGA 45807 Query 279563 CTC 279565 ||| Sbjct 45808 CTC 45810 >seq492 Length=112588 Score = 98.7 bits (108), Expect = 2e-15 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 279689 TCTGCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCAT 279748 || ||| || || || |||| |||||||||||||||||||| ||||| |||| || || Sbjct 90456 TCAGCCTGTTGGCTCATTGTCCGGTGGTTGGAAGATGAAGCTAGCCCTTGCTCGTGCTAT 90397 Query 279749 TCTACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAA 279808 |||| | || ||||| || |||||||| || || ||||| || |||| |||| Sbjct 90396 GCTACAGAAGGCTGATGTTCTTCTGCTTGACGAACCTACCAATCATTTGGATGTTGCCAA 90337 Query 279809 CGTAGCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTC 279868 || ||||||| | ||| ||| || | | | | || || ||||| || Sbjct 90336 TGTGAAGTGGCTAGAAACTTACTTAAAGAGCCACCCCGACATCACCTCACTGATTGTTTC 90277 Query 279869 TCACGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAG 279920 |||||||||||| ||| | |||| || | ||| |||| |||||| ||| Sbjct 90276 TCACGACTCTGGTTTCTTGGATGAGGTAACCACTGACATCTATCACTACGAG 90225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027824776557833