Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq355 150 3e-31
seq366 149 1e-30
seq24 138 2e-27
seq425 107 4e-18
>seq355
Length=31638
Score = 150 bits (166), Expect = 3e-31
Identities = 146/188 (78%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||||| || || | ||||| |||| |||||| || ||||| ||
Sbjct 6279 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGATC 6338
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | ||||| || || |||||||| ||||| || || ||||| | |||||| |||
Sbjct 6339 AGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGTCG 6398
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453
|||||||||| || || || || | |||||| || || ||||| ||||||||||||||
Sbjct 6399 ATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGACGAAA 6458
Query 68454 ATCTGCAT 68461
||||||||
Sbjct 6459 ATCTGCAT 6466
>seq366
Length=80546
Score = 149 bits (164), Expect = 1e-30
Identities = 174/235 (74%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286
|||| | ||||| || || |||| |||| ||||| || ||||| ||||| ||||| |
Sbjct 27316 TTTACTGGCCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGT 27375
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
| |||||||| || | ||||| || | |||||| ||||| || || || | || || |
Sbjct 27376 AGTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGAT 27435
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406
| || || || || ||||| ||||||||||| | ||||| || || || || | |
Sbjct 27436 CCGGAGGGATACCCTCCTTATCTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAAG 27495
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || || || | |||||||||||| || ||||| ||||||||||| || |||||
Sbjct 27496 ACTCAACCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 27550
Score = 114 bits (126), Expect = 2e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||| ||| || || ||||| || ||||| || || |||||
Sbjct 27921 CCACCACGCAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATATTGTAGTCGGAC 27980
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | ||||| |||||||| || || | || ||||| || |||
Sbjct 27981 AGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGGGGGA 28040
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| || |||||||| | |||||| ||||||||||| | || || ||
Sbjct 28041 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCGACC 28100
Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437
|| | |||||||| || || ||
Sbjct 28101 TCGAGAGTGATGGTCTTGCCGGT 28123
>seq24
Length=141979
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || || || | || | ||||| || | |||||| || ||||| ||
Sbjct 81267 TTCTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 81208
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | |||||||| || |||||||| ||||||||||| ||||| | ||||||| |||
Sbjct 81207 AGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 81148
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| ||||| | || || || |||| ||| ||||| || ||||| ||||||||||||||
Sbjct 81147 ATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 81089
>seq425
Length=119061
Score = 107 bits (118), Expect = 4e-18
Identities = 292/442 (66%), Gaps = 20/442 (5%)
Strand=Plus/Plus
Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998
|| || ||||||||||| || || || |||||| ||||||| ||||||| | ||
Sbjct 45272 ACACCGGCCTTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGA 45331
Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGT 10058
|||||| |||||||||||| |||||||| || | || |||| || || ||
Sbjct 45332 GAAATGTTCTCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGTTGCCAAGG 45391
Query 10059 GCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATG 10118
|| || | ||||| || |||||||| || ||||| |||||||||| | |||||||
Sbjct 45392 GCCACTAAGAGACGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATG 45451
Query 10119 CCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCC 10178
|| | | | ||| || | || || | ||| ||||| || || |||| || ||
Sbjct 45452 CCGAGTAAACCGCAAGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCG 45511
Query 10179 TCGACGA--TGCTCTTTACCACGT------CAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230
|| || ||||| | || || | |||| | |||||| || | ||
Sbjct 45512 GTGATGATTTGCTC---AACAAGTTCCTTGCCAGGG--CGGTTGTTC---AGGTGGGAGA 45563
Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290
||| || |||| | ||| || ||||| || ||| || | |||||| || |
Sbjct 45564 ACAATAGGCAGGCAAAGTCAGTGTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAAA 45623
Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350
| ||| |||||||| || || || ||||||||||| || || | | || | ||
Sbjct 45624 AGGTCAGGCCGGGCATCAGACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCC-- 45681
Query 10351 AGAACAGAAGA--CCCTCCACG 10370
|||| |||||| ||||| |||
Sbjct 45682 AGAAAAGAAGATGCCCTCGACG 45703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921611881984360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |