Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq355 150 3e-31 seq366 149 1e-30 seq24 138 2e-27 seq425 107 4e-18 >seq355 Length=31638 Score = 150 bits (166), Expect = 3e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||||| || || | ||||| |||| |||||| || ||||| || Sbjct 6279 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGATC 6338 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | ||||| || || |||||||| ||||| || || ||||| | |||||| ||| Sbjct 6339 AGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGTCG 6398 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 |||||||||| || || || || | |||||| || || ||||| |||||||||||||| Sbjct 6399 ATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGACGAAA 6458 Query 68454 ATCTGCAT 68461 |||||||| Sbjct 6459 ATCTGCAT 6466 >seq366 Length=80546 Score = 149 bits (164), Expect = 1e-30 Identities = 174/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | ||||| || || |||| |||| ||||| || ||||| ||||| ||||| | Sbjct 27316 TTTACTGGCCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGT 27375 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | |||||||| || | ||||| || | |||||| ||||| || || || | || || | Sbjct 27376 AGTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGAT 27435 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || || || || ||||| ||||||||||| | ||||| || || || || | | Sbjct 27436 CCGGAGGGATACCCTCCTTATCTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAAG 27495 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || || | |||||||||||| || ||||| ||||||||||| || ||||| Sbjct 27496 ACTCAACCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 27550 Score = 114 bits (126), Expect = 2e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||| ||| || || ||||| || ||||| || || ||||| Sbjct 27921 CCACCACGCAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATATTGTAGTCGGAC 27980 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | ||||| |||||||| || || | || ||||| || ||| Sbjct 27981 AGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGGGGGA 28040 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || |||||||| | |||||| ||||||||||| | || || || Sbjct 28041 ATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCGACC 28100 Query 68415 TCCAAGGTGATGGTTTTTCCCGT 68437 || | |||||||| || || || Sbjct 28101 TCGAGAGTGATGGTCTTGCCGGT 28123 >seq24 Length=141979 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || || || | || | ||||| || | |||||| || ||||| || Sbjct 81267 TTCTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 81208 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | |||||||| || |||||||| ||||||||||| ||||| | ||||||| ||| Sbjct 81207 AGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 81148 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || |||| ||| ||||| || ||||| |||||||||||||| Sbjct 81147 ATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 81089 >seq425 Length=119061 Score = 107 bits (118), Expect = 4e-18 Identities = 292/442 (66%), Gaps = 20/442 (5%) Strand=Plus/Plus Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998 || || ||||||||||| || || || |||||| ||||||| ||||||| | || Sbjct 45272 ACACCGGCCTTCTGGTAGTCACCAACACGTTTCTCGAAAAAGTTGGTCTTGCCCCCCAGA 45331 Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGT 10058 |||||| |||||||||||| |||||||| || | || |||| || || || Sbjct 45332 GAAATGTTCTCCATGAAGTCGAAGGGGTTGGTAGCACGGTACACCTTGTCGTTGCCAAGG 45391 Query 10059 GCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATG 10118 || || | ||||| || |||||||| || ||||| |||||||||| | ||||||| Sbjct 45392 GCCACTAAGAGACGGTCGGCAACGAACTCAATATACTGCTTCATCAGGTCAGCGTTCATG 45451 Query 10119 CCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCC 10178 || | | | ||| || | || || | ||| ||||| || || |||| || || Sbjct 45452 CCGAGTAAACCGCAAGGAAGAGCCTCAGTCAGGAACTCCTTCTCAATGACGACGGCGTCG 45511 Query 10179 TCGACGA--TGCTCTTTACCACGT------CAAGGGACAGCTTGTTCTCGAGCTTCGAAT 10230 || || ||||| | || || | |||| | |||||| || | || Sbjct 45512 GTGATGATTTGCTC---AACAAGTTCCTTGCCAGGG--CGGTTGTTC---AGGTGGGAGA 45563 Query 10231 ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACA 10290 ||| || |||| | ||| || ||||| || ||| || | |||||| || | Sbjct 45564 ACAATAGGCAGGCAAAGTCAGTGTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAAA 45623 Query 10291 AACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGG 10350 | ||| |||||||| || || || ||||||||||| || || | | || | || Sbjct 45624 AGGTCAGGCCGGGCATCAGACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCC-- 45681 Query 10351 AGAACAGAAGA--CCCTCCACG 10370 |||| |||||| ||||| ||| Sbjct 45682 AGAAAAGAAGATGCCCTCGACG 45703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921611881984360