Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq366 98.7 8e-16
seq24 91.5 1e-13
seq355 87.8 2e-12
>seq366
Length=80546
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|| ||||| || | || ||| | ||||| ||||| || |||||||||||||| |||
Sbjct 27324 CCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAG 27383
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| ||||| ||| || || || || || || | || |||||||| || ||||||||
Sbjct 27384 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGG 27443
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| || || || || |||||| ||| | | |||| || || | || || ||
Sbjct 27444 ATACCCTCCTTATCTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAACC 27503
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | ||| | |||||||| || ||||| || || || || |||||
Sbjct 27504 TCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 27550
>seq24
Length=141979
Score = 91.5 bits (100), Expect = 1e-13
Identities = 128/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
|| || |||||||| || || ||| || ||| ||||| || || |||||| ||||
Sbjct 81267 TTCTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATC 81208
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314
|| |||||||||||||| |||||||| || ||||| ||||| || | | ||
Sbjct 81207 AGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGTCG 81148
Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374
| ||||| | ||| ||||| |||| ||| | || || || ||||| || || || |||
Sbjct 81147 ATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 81088
>seq355
Length=31638
Score = 87.8 bits (96), Expect = 2e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
|| || |||||||| ||| || || || ||| || || || || |||||| ||||
Sbjct 6279 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGATC 6338
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314
|| |||||||| ||||| |||||||| || || || ||||| || | | ||
Sbjct 6339 AGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGTCG 6398
Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374
| |||||| | ||| || || || | ||| | ||| || || || || || || || |||
Sbjct 6399 ATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGACGAAA 6458
Query 114375 ATCTGCAT 114382
||||||||
Sbjct 6459 ATCTGCAT 6466
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420129725085756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |