Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq355 116 9e-21
seq366 105 2e-17
>seq355
Length=31638
Score = 116 bits (128), Expect = 9e-21
Identities = 141/191 (74%), Gaps = 6/191 (3%)
Strand=Plus/Plus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| || ||||| || || |||| || || || |||||||||
Sbjct 6279 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGATC 6338
Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| |||||||| ||| ||| || || || ||||||||||| || | || || ||
Sbjct 6339 AGGCGCTGTTG---ATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTG 6395
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || || || || || ||||||||||| || || || |||||||||
Sbjct 6396 TCGATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGACG 6455
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 6456 AAAATCTGCAT 6466
>seq366
Length=80546
Score = 105 bits (116), Expect = 2e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| || || ||||||| ||| || || || || || | || || || || ||
Sbjct 27360 TCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAA 27419
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| ||| ||||| || || ||||| || || |||| ||| || ||
Sbjct 27420 ATCAGACGCTGCTGATCCGGAGGGATACCCTCCTTATCTTGAATCTTCGATTTGACATTG 27479
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| |||| ||| || || || || || ||||| || || || || ||||||||||||
Sbjct 27480 TCAATAGTATCAGAAGACTCAACCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACG 27539
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 27540 AAGATTTGCAT 27550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179640600624014
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |