Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq355 116 9e-21 seq366 105 2e-17 >seq355 Length=31638 Score = 116 bits (128), Expect = 9e-21 Identities = 141/191 (74%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| || ||||| || || |||| || || || ||||||||| Sbjct 6279 TTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGATC 6338 Query 288346 AGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| ||| ||| || || || ||||||||||| || | || || || Sbjct 6339 AGGCGCTGTTG---ATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTG 6395 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || || || ||||||||||| || || || ||||||||| Sbjct 6396 TCGATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGACG 6455 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 6456 AAAATCTGCAT 6466 >seq366 Length=80546 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||||| ||| || || || || || | || || || || || Sbjct 27360 TCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAA 27419 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| ||| ||||| || || ||||| || || |||| ||| || || Sbjct 27420 ATCAGACGCTGCTGATCCGGAGGGATACCCTCCTTATCTTGAATCTTCGATTTGACATTG 27479 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| ||| || || || || || ||||| || || || || |||||||||||| Sbjct 27480 TCAATAGTATCAGAAGACTCAACCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACG 27539 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 27540 AAGATTTGCAT 27550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179640600624014