Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq425 105 1e-17 seq6 87.8 4e-12 >seq425 Length=119061 Score = 105 bits (116), Expect = 1e-17 Identities = 169/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 243499 CAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGC 243558 ||||||||||| || || || | | || ||||| ||| | || ||| |||| || Sbjct 45522 CAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCCTGACTGAGGCTCTTCCTTG- 45464 Query 243559 CGGCTTA-TTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCG 243617 ||| ||| | ||||||||| |||| || ||| ||||| || || ||||| |||||||| Sbjct 45463 CGGTTTACTCGGCATGAACGCTGACCTGATGAAGCAGTATATTGAGTTCGTTGCCGACCG 45404 Query 243618 CATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTAT 243677 | || | || ||||| | || || |||||| | | |||||||| | ||| || Sbjct 45403 TCTCTTAGTGGCCCTTGGCAACGACAAGGTGTACCGTGCTACCAACCCCTTCGACTTCAT 45344 Query 243678 GGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 |||| |||||| || || || || ||||| ||||| || ||||| |||| || || Sbjct 45343 GGAGAACATTTCTCTGGGGGGCAAGACCAACTTTTTCGAGAAACGTGTTGGTGACTACCA 45284 >seq6 Length=117836 Score = 87.8 bits (96), Expect = 4e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 334182 GGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCG 334241 || || || |||| ||| |||| || || ||||| ||||| || || || | ||| Sbjct 45762 GGAAATCCCTCAACCTGCTCGTTGTTGATGGCACGCATGAGAGTAGACTTTCCAGAACCG 45703 Query 334242 TTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGA 334301 ||||| || || ||||||||||| | |||||||| ||| | | || | ||| ||| Sbjct 45702 TTTGGACCGCAAAGACCGTAGCGCTGGCCACGCTTTAGACGCAGGTGGGTCTGGTTGAGA 45643 Query 334302 AGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 ||||| || |||| || || ||||| || || | |||||||||||||| Sbjct 45642 AGAATCTTAGCACCGTAGGCGAGAGAGAAAGTGCAGTTGCACAGATCCTCACC 45590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102867098716550