Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq425 105 1e-17
seq6 87.8 4e-12
>seq425
Length=119061
Score = 105 bits (116), Expect = 1e-17
Identities = 169/240 (70%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 243499 CAAATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGC 243558
||||||||||| || || || | | || ||||| ||| | || ||| |||| ||
Sbjct 45522 CAAATCATCACCGACGCCGTCGTCATTGAGAAGGAGTTCCTGACTGAGGCTCTTCCTTG- 45464
Query 243559 CGGCTTA-TTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCG 243617
||| ||| | ||||||||| |||| || ||| ||||| || || ||||| ||||||||
Sbjct 45463 CGGTTTACTCGGCATGAACGCTGACCTGATGAAGCAGTATATTGAGTTCGTTGCCGACCG 45404
Query 243618 CATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTAT 243677
| || | || ||||| | || || |||||| | | |||||||| | ||| ||
Sbjct 45403 TCTCTTAGTGGCCCTTGGCAACGACAAGGTGTACCGTGCTACCAACCCCTTCGACTTCAT 45344
Query 243678 GGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737
|||| |||||| || || || || ||||| ||||| || ||||| |||| || ||
Sbjct 45343 GGAGAACATTTCTCTGGGGGGCAAGACCAACTTTTTCGAGAAACGTGTTGGTGACTACCA 45284
>seq6
Length=117836
Score = 87.8 bits (96), Expect = 4e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 334182 GGGAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCG 334241
|| || || |||| ||| |||| || || ||||| ||||| || || || | |||
Sbjct 45762 GGAAATCCCTCAACCTGCTCGTTGTTGATGGCACGCATGAGAGTAGACTTTCCAGAACCG 45703
Query 334242 TTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGA 334301
||||| || || ||||||||||| | |||||||| ||| | | || | ||| |||
Sbjct 45702 TTTGGACCGCAAAGACCGTAGCGCTGGCCACGCTTTAGACGCAGGTGGGTCTGGTTGAGA 45643
Query 334302 AGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
||||| || |||| || || ||||| || || | ||||||||||||||
Sbjct 45642 AGAATCTTAGCACCGTAGGCGAGAGAGAAAGTGCAGTTGCACAGATCCTCACC 45590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102867098716550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |