Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq366 89.7 6e-13 >seq366 Length=80546 Score = 89.7 bits (98), Expect = 6e-13 Identities = 163/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Plus Query 41974 TTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGT 42033 |||| | ||||| | | ||||| |||| ||| | || |||||||||||| |||| Sbjct 27316 TTTACTGGCCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGT 27375 Query 42034 AATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT 42093 | || | || || || | || || |||||||| || || || || || |||||||| | Sbjct 27376 AGTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGAT 27435 Query 42094 CGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTC 42152 | | || | | |||||| | | ||| | || | ||||| | | | || || Sbjct 27436 CCGGAGGGATACCCTCCTTAT-CTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAA 27494 Query 42153 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || | |||||||||||||| || || ||||| || ||||||||||| Sbjct 27495 GACTCAACCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 27550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543206600583920