Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq142 109 5e-19 seq366 98.7 9e-16 >seq142 Length=98154 Score = 109 bits (120), Expect = 5e-19 Identities = 455/717 (63%), Gaps = 6/717 (1%) Strand=Plus/Plus Query 123605 CGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAG 123664 ||| ||||||| |||| |||||| ||||| || |||||||||||||| | ||| |||| Sbjct 2863 CGAGACCGGAAACCCGTTCATGCTGTACAAGGATGCCTGCAACAGGAAGAGCAACCAGAA 2922 Query 123665 CAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGC 123724 ||| |||| || || | || || ||| |||| || ||||| ||| ||| | Sbjct 2923 GAACCTGGGCACTATTCGCAGCTCCAACCTGTGCACCGAGATCATCGAGTACTGCGCCCC 2982 Query 123725 CGATCAAGTGGCCGTGTGTAATTTGGCTTCGAT-----TTGCGTGAATCGTTGCGTCGAA 123779 ||| |||| || ||||| || |||| ||| | | ||| | || | | || Sbjct 2983 TGATGAAGTTGCTGTGTGCAACCTGGCCTCGCTGGCCCTACCGTCGTTTGTCGATTACAA 3042 Query 123780 -AACGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTT 123838 || |||| | | | ||||| | ||| | || || || || || || | Sbjct 3043 CAAGGGCGAGTATGACTTCCAGAAGCTGCACGAGATCACCAAGGTCGTCGTGCGCAACCT 3102 Query 123839 GAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAA 123898 |||| || ||||| || |||| |||||| || || || | | ||| || Sbjct 3103 GAACCGCATCATCGACGTCAATTATTATCCCGTGCCCGAGGCTCATAACAGCAATATGCG 3162 Query 123899 ACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCAT 123958 ||| | || | ||||| || |||| || | ||||| || || || || ||||| Sbjct 3163 CCACCGCCCTATTGGAGTTGGTGTTCAGGGTCTAGCCGATGCCTTCCTAGCTCTACGCAT 3222 Query 123959 GCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTA 124018 ||| | || | ||| || ||| |||| ||| || ||| || || || | Sbjct 3223 GCCCTTTGAGTCTGCCGAGGCCCGCACGCTGAATAAGCAGATTTTCGAGACCATCTACCA 3282 Query 124019 CGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGC 124078 || ||| | || ||||| |||| | | | ||| | ||| | || | Sbjct 3283 CGCCGCCCTAACTGCCTCGTGCGAGATTGCTCAGACCGAAGGCACCTACTCGACCTATGA 3342 Query 124079 GGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAA 124138 |||| || | | ||| ||| |||||| |||||||||||||| || || | | Sbjct 3343 GGGCTCTCCTGTTTCGCAAGGCATTCTGCAGTTCGACATGTGGAATGTCACCCCCAGCGA 3402 Query 124139 TTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGTAACTCGCT 124198 ||||||||||| | | ||| ||| || | ||||||| |||| |||||||| Sbjct 3403 CCTGTGGGACTGGGCCTCGCTCAAAGAACAGATCAAGCAGCACGGTGTGCGAAACTCGCT 3462 Query 124199 GTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCTT 124258 | | | || ||||||||| || | || ||||||| | || |||||||| | ||| Sbjct 3463 GCTCCTAGCCCCCATGCCGACTGCTTCGACCTCTCAAATCCTGGGCAACAACGAGTGCTT 3522 Query 124259 CGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGT 124315 |||||| | |||| ||| | ||| || || ||||| || ||||| || || || Sbjct 3523 CGAGCCCTACACTTCCAACATCTACCAACGTCGTGTGTTGGCTGGCGAGTTCCAGGT 3579 >seq366 Length=80546 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| || || | || || ||||| || || || |||||||| || || || ||| | Sbjct 27324 CCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAG 27383 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| |||| || || || || | |||| || ||||| ||||| || Sbjct 27384 AGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGG 27443 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || || ||||||||||| || ||||| || | || || |||||||| || Sbjct 27444 ATACCCTCCTTATCTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAACC 27503 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | |||||||| || ||||| || || || |||||||| Sbjct 27504 TCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 27550 Score = 98.7 bits (108), Expect = 9e-16 Identities = 134/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || || ||||| |||||||| || ||| | ||| | || || Sbjct 27939 ACCAGGTGGAGAGTAGACTCCTTCTGGATATTGTAGTCGGACAGGGTGCGACCGTCCTCA 27998 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | ||| ||||| ||| | || | || |||||||| || ||||| || || ||||| ||| Sbjct 27999 AGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGA 28058 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || || |||| || | |||||||||||||||||| |||||||| | || ||| Sbjct 28059 ATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTG 28118 Query 45312 CCGGTTA 45318 ||||||| Sbjct 28119 CCGGTTA 28125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451998041513480