Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq142 165 1e-35
>seq142
Length=98154
Score = 165 bits (182), Expect = 1e-35
Identities = 455/682 (67%), Gaps = 14/682 (2%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTT-CTCAGATAGTACATGC 203897
|| ||| || |||||||| |||| |||| |||||| | | ||||||||||||||
Sbjct 3934 CTGGTCAACAGTGAACTGGATGGGAGCGGCGGC-GGCCTGGGTACGCAGATAGTACATGC 3876
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
| ||||| || || || ||| || | ||||||| | | ||||| || | | |
Sbjct 3875 CAGTCTTGAGACCAAGCTTCCAACCAGCAAAGTGCATGCTGGTGATTTTGCCCATGGTAG 3816
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016
| || |||||| |||||||| ||||| || ||||||||| ||||| ||||| |||
Sbjct 3815 GATCTTTCATGTGGATGTTCAGCGACTGCGACTGATCGATGAAA-GCGCCACGATCGGCG 3757
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
||||| | | || ||| ||| || || ||||| || |||||| ||| | | || ||
Sbjct 3756 GCCATTTGCACAACGGTGCGCTGGGAGATTTCCCAAACAGTCTTGTACAAGGCCTTGATG 3697
Query 204077 TGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135
| ||| | | || | || ||| ||||| ||||||||| || | | || |
Sbjct 3696 TCGGCAGGGATA-CTGGGAATGTTCTGAATCGAACCGTTGTCGCTGATGATGCGGTTCTT 3638
Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195
| | | || ||| | || | || || || || | ||| |||||||| ||
Sbjct 3637 CATGGCATCGGACCAAAGACCGAGGTCGACTAGGTCACGTAGCAGCCAGGGGTTGACGAC 3578
Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255
||| || || || | || ||| | || | | | |||| ||| | || |||||
Sbjct 3577 CTGGAACTCGCCAGCCAACACACGACGTTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCA 3518
Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315
|||||||||||| | || |||| ||| || || |||||||| || |||||||| ||
Sbjct 3517 CTCGTTGTTGCCCAGGATTTGAGAGGTCGAAGCAGTCGGCATGGGGGCTAGGAGCAGCGA 3458
Query 204316 GTTGCGCACACCGTATTTTTGGACCCTGCGC-TTCAGAGAGGTCCAGTCGTGCATCGCAC 204374
||| |||||||||| | | || ||| | || || |||| |||||| || | |
Sbjct 3457 GTTTCGCACACCGTGCTGCTTGA-TCTGTTCTTTGAGCGAGGCCCAGTCCCACAGGTCGC 3399
Query 204375 TGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGT 204434
|||| | || ||||||||||||||| | |||||||| || || ||||| |
Sbjct 3398 TGGGGGTGACATTCCACATGTCGAACTGCAGAATGCCTTGCGAAACAGGAGAGCCCTCAT 3339
Query 204435 ACGTCGGATAAGGCTGATCCTC-TTCT--GCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491
| |||| || | || | || ||| || | || ||||||||| | | |||| |
Sbjct 3338 AGGTCGAGTA--GGTG-CCTTCGGTCTGAGCAATCTCGCACGAGGCAGTTAGGGCGGCGT 3282
Query 204492 AGTACATGGTCTCAAAGATCTG 204513
||| |||||||| || |||||
Sbjct 3281 GGTAGATGGTCTCGAAAATCTG 3260
Score = 100 bits (110), Expect = 5e-16
Identities = 440/684 (64%), Gaps = 12/684 (2%)
Strand=Plus/Minus
Query 205060 CTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACA 205119
|||||| ||| |||||| ||| | || || |||||| ||| ||| || || ||
Sbjct 2794 CTCGTACTTTTCGTACAGAGCCTCGAACTCGTCACCGTAGCAGTCGGCCAGACCGGGGCA 2735
Query 205120 TTTTTTGGGACACATCAGAGACCACATCT-GATCGTCTTTCACCCTCTCCATAAACAGGT 205178
| ||||| ||||| || | ||| | | || ||| || | || ||| |||||||
Sbjct 2734 CTCGTTGGGGCACATGAGTGTCCAGTTGGCGTTCTTCTCG-ACACGCTTCATGAACAGGT 2676
Query 205179 CGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCT 205238
|| ||||||||| | ||||| || ||||| | ||| | || | || ||||||
Sbjct 2675 CGGGAATCCACAGGGCTAGGAACAGGTCGCGGGCACGAATCTCCTCCTTGCCGTGGTTCT 2616
Query 205239 TTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297
| | ||| || || || | | ||||| ||||||||||||| | | || |
Sbjct 2615 TGCGTAGGTCGAGG-AACTCGAAGACATCGGCATGCCACGGCTCTAGGTAGATAGCAAAG 2557
Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGC 205357
|| || || | |||||| ||||||||||| || ||| | | |||||| || |||
Sbjct 2556 GCTCCAGGGCGCTTGTTGCCACCCTGGTCAACATAGCGGGCGGTGTTGTTGAAGACGCGC 2497
Query 205358 AGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCC--TTCAG 205415
||||| ||||| | ||||| | || ||||| |||| ||| |||||| | |
Sbjct 2496 AGCATAGGCACGATGCCGTTTGACGTGCCGTTAGTGCCAGCAATGTACGAGCCGGTGGCG 2437
Query 205416 CCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGC-AC 205474
| ||| || || | | |||||| || || | ||||| |||| || | |
Sbjct 2436 CGGATACGGTG--GACGTTCAGGCCAATACCACCGGCCATCTTGGAGATCATAGCACAAG 2379
Query 205475 TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTC-ACCAGATAGCA 205533
|||| ||| || |||||| || | ||| || ||| || |||| |||| ||||
Sbjct 2378 TCTT-CAGCGTATCGTAGATACCCTCAATGCTGTCATCCTTCA-TGTCGACCAAGAAGCA 2321
Query 205534 CGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAA 205593
|| | |||| ||| ||||| |||| ||| ||||| || |||||| ||||
Sbjct 2320 TGACGATAGCTGGGCCTGCGGCGTGCCAGCGTTGAACAGCGTAGGTGAGGCGTGTGTGAA 2261
Query 205594 GCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGAAT 205653
|||| | || | |||| ||||| ||||| | || | | | ||| ||
Sbjct 2260 AAGCTTACTGGACATGTAGTTGTACGTCTCGAGCACACGGTCGACACGGTCGCCCCAGAT 2201
Query 205654 ACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCACCTT 205713
||| | ||| | | ||||| | ||| || || | ||| | | | | ||| || |||
Sbjct 2200 ACCGACGGCAACACGCATGATCATGTGCTGCGGACGCTCGACGATCTTGCCGTCCAACTT 2141
Query 205714 GAGCAGATAGGCTCTCTCTAGGGT 205737
||||||||| | || ||| | |||
Sbjct 2140 GAGCAGATACGATCGCTCCAAGGT 2117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795146125291280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |