Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq366 114 3e-20
seq355 107 5e-18
seq24 107 5e-18
>seq366
Length=80546
Score = 114 bits (126), Expect = 3e-20
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||||||||| |||||||| |||| |||||||| | || || | || ||
Sbjct 27936 AGGACCAGGTGGAGAGTAGACTCCTTCTGGATATTGTAGTCGGACAGGGTGCGACCGTCC 27995
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || |||||||||||||| || |||||||||||||| || ||| || || |||
Sbjct 27996 TCAAGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCC 28055
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| || |||| |||||| | | || || || | ||||| |||
Sbjct 28056 TGAATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTC 28115
Query 199598 TTACCCGT 199605
|| || ||
Sbjct 28116 TTGCCGGT 28123
Score = 96.9 bits (106), Expect = 8e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || || || || || ||||||||||| | ||||||||| | | ||
Sbjct 27330 CGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTA 27389
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| ||||||||||| ||||| || || ||||||||||| |||||| || ||
Sbjct 27390 CGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGGATACCC 27449
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || |||||||| || || || | || || | | || || || |
Sbjct 27450 TCCTTATCTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAACCTCAAGG 27509
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| || || || |||||||| || || || |||||
Sbjct 27510 GTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTG 27547
>seq355
Length=31638
Score = 107 bits (118), Expect = 5e-18
Identities = 136/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| ||||||||| | || || | ||||| || |||||||| || |||||||
Sbjct 6277 CCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCTAGCTGCTTGCCAGCGAAGA 6336
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| || ||||| || ||||| ||| || || ||||| ||||| ||| || |
Sbjct 6337 TCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTAGACTTGACATTGT 6396
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| |||||||| | || || || | ||||||||||||||||| || || || || |
Sbjct 6397 CGATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTACCCGTAAGGGTCTTGACGA 6456
Query 199620 AAATTTG 199626
|||| ||
Sbjct 6457 AAATCTG 6463
>seq24
Length=141979
Score = 107 bits (118), Expect = 5e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| ||||||||||| |||||| | ||||| || |||||||| || |||||||
Sbjct 81269 CCTTCTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 81210
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| || ||||| |||||||| ||| || || || || ||||| ||| ||| |
Sbjct 81209 TCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGACGTTGT 81150
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| ||||| | | || || |||| || || ||||||||||| || || || || |
Sbjct 81149 CGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 81090
Query 199620 AA 199621
||
Sbjct 81089 AA 81088
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178907809196171
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |