Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq366 116 4e-21
seq24 109 6e-19
seq355 105 8e-18
>seq366
Length=80546
Score = 116 bits (128), Expect = 4e-21
Identities = 166/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 46360 TTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTA 46419
||| | |||||| | | ||||| |||||||| | ||| ||||||||| || |||||
Sbjct 27317 TTACTGGCCTCCACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGTA 27376
Query 46420 GTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479
|||||| || || || | || || |||||||||||||| || |||| |||||||| ||
Sbjct 27377 GTCGGAGAGGGTACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATC 27436
Query 46480 GGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA 46539
| || | | |||||| || |||||| |||| | | | || || ||
Sbjct 27437 CGGAGGGATACCCTCCTTATCTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAAGA 27496
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || | |||||||||||||| || || || || || |||||||||||
Sbjct 27497 CTCAACCTCAAGGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 27550
Score = 104 bits (114), Expect = 3e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| || | ||| |||||| ||||||||||||||||| || ||||| |||| ||
Sbjct 27939 ACCAGGTGGAGAGTAGACTCCTTCTGGATATTGTAGTCGGACAGGGTGCGACCGTCCTCA 27998
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|| ||||| |||||||| || | ||||||||||| | || | | |||||| |||
Sbjct 27999 AGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGGGGGAATACCCTCCTTATCCTGA 28058
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||||| | | | |||||| || || || || | |||||||| |||
Sbjct 28059 ATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTG 28118
Query 46565 CCCGT 46569
|| ||
Sbjct 28119 CCGGT 28123
>seq24
Length=141979
Score = 109 bits (120), Expect = 6e-19
Identities = 135/182 (74%), Gaps = 2/182 (1%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| |||||||| || | |||||| | || || ||||||||||| ||||| |
Sbjct 81269 CCTTCTGGATGTTGTAGTCAGACAAAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGA 81210
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||| ||||| | || | || ||||||||| |||||| ||||| ||| |
Sbjct 81209 TCAGGCGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCTTGGATCTTGGACTTGA-CGTTG 81151
Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | |||||| || || || |||| || ||||| || |||||||| || || ||
Sbjct 81150 TCGATCGTGTCCGAGGACTCGACCTCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 81091
Query 46583 AA 46584
||
Sbjct 81090 AA 81089
>seq355
Length=31638
Score = 105 bits (116), Expect = 8e-18
Identities = 152/213 (71%), Gaps = 1/213 (0%)
Strand=Plus/Plus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||| ||| ||| |||| ||||| ||||||||||| || ||||| | || ||
Sbjct 6259 ACAAGATGATATG-ACTGACCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTCT 6317
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| ||||| |||| |||||| || || | || | || |||||| ||| |
Sbjct 6318 AGCTGCTTGCCAGCGAAGATCAGGCGCTGTTGATCCGGGGGAATGCCCTCCTTATCCTGG 6377
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| ||||| | | | ||||| || || || || | ||||| || ||
Sbjct 6378 ATCTTAGACTTGACATTGTCGATGGTGTCTGAGGACTCAACCTCAAGGGTGATCGTCTTA 6437
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597
||||| || || || || || || ||||| |||
Sbjct 6438 CCCGTAAGGGTCTTGACGAAAATCTGCATCTTG 6470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565231949216760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |