Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq425 196 5e-45 seq366 120 3e-22 seq355 105 7e-18 seq24 96.9 3e-15 >seq425 Length=119061 Score = 196 bits (216), Expect = 5e-45 Identities = 542/823 (66%), Gaps = 11/823 (1%) Strand=Plus/Plus Query 132624 TTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTT 132683 |||||| ||||| || || || ||| ||| |||||| | ||| || || |||||||| Sbjct 45301 TTTCTCGAAAAAGTTGGTCTTGCCCCCCAGAGAAATGTTCTCCATGAAGTCGAAGGGGTT 45360 Query 132684 GGCTGTGTTGTAGTGCTTGGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTC 132743 || | ||| |||| | | ||| | || | || | |||||| |||||||| Sbjct 45361 GGTAGCACGGTACACCTTGTCGTTGCCAAGGGCCACTAAGAGACGGTCGGCAACGAACTC 45420 Query 132744 GATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGAC-GCACCGGCAGCGCTTCGG 132802 || || ||| ||| || || | || || | || ||| || || || || | Sbjct 45421 AATATACTGCTTCATCAGGTCAGCGTTCATGCCGAGTAAACCGCAA-GGAAGAGCCTCAG 45479 Query 132803 TGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGC 132862 | || || | ||| ||| |||| |||||||||| ||||| | ||| | || || Sbjct 45480 TCAGGAACTCCTTCTCAATGACGACGGCGTCGGTGATGATTTGCTCAACAAGTTCCTTGC 45539 Query 132863 TCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGT 132922 || || | || || ||||| | ||| |||||||| |||| ||||| | Sbjct 45540 CAGGGCGGTTGTTCAGGTGGGAGAACAATAGGCAGGCAAAGTCAGTGTGCAGACCCTCAT 45599 Query 132923 CCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCC 132982 | | |||||| || ||||| || |||| ||||||||| || || || || |||| Sbjct 45600 CACGGGAAATCAGCTCGTTAGAAAAGGTCAGGCCGGGCATCAGACCACGCTTGCGCAGCC 45659 Query 132983 AAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCA 133042 |||| || | ||| || || |||||||||| |||||||||||| || ||||| | | Sbjct 45660 AAAAGATAGAGGCAAAGGCTCCAGAAAAGAAGATGCCCTCGACGGCAGCAAAAGCGATTA 45719 Query 133043 GGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTT 133102 |||||| | || || | |||| || | |||||| || ||||| |||| |||| Sbjct 45720 GGCGCTGAGCAAAAGTTGATTCTCTGTCGCAGATCCATTTGAGAGCCCAGTCGG-CTTTG 45778 Query 133103 CTTTG-ACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAA 133161 | | | ||| || || || || || ||||| ||| | | | | | || ||| Sbjct 45779 CGGCGTATGCAGGGAATGGTGTCAATAGCGTTGAAC--AGGTACGTGCGCTGGGCAGGCT 45836 Query 133162 C--GCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGA 133219 | | || || ||||| | || || | || ||||| | ||||||||| || Sbjct 45837 CCTTGATATAAGTATCGATCAACAAAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGA 45896 Query 133220 TTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGA 133279 | || || || || ||||| || ||||| | ||| || || || ||||||||| | Sbjct 45897 TCTGGAAACCATAGAAGCAACGAGCCTCAGGGATCTGGACCTCGCCAGAGAAACGCTCAA 45956 Query 133280 CCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGA 133339 |||| || |||||||| ||||| || ||| || || |||||||| | ||| ||||| Sbjct 45957 CCAGGTTCTCGTTGACAATGCCATCAGAGGCAGCAAAGAAGGCCAGAATGTGAGAGATGA 46016 Query 133340 AATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCA 133396 | | |||||| | | | | || | ||||||| | || ||||| || || | Sbjct 46017 AGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAGTCGTGGAGATCTTTGGATAGATCAA 46076 Query 133397 CCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 |||||| | ||||| ||||| ||||| || || || ||||| Sbjct 46077 TCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTCTTATACAT 46119 >seq366 Length=80546 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| ||||||||||||||| | || || ||| | | Sbjct 27550 ATGCAAATCTTCGTCAAGACTCTCACTGGCAAAACCATCACCCTTGAGGTTGAGTCTTCT 27491 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | ||| || || | || || ||||| || || | || || Sbjct 27490 GATACTATTGACAATGTCAAATCGAAGATTCAAGATAAGGAGGGTATCCCTCCGGATCAG 27431 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| || ||||| |||||||| || | || |||||| |||||||||| Sbjct 27430 CAGCGTCTGATTTTTGCCGGCAAGCAGCTGGAGGATGGCCGTACCCTCTCCGACTACAAC 27371 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 || |||||||| | || || ||| |||| |||||| || | || |||| Sbjct 27370 ATTCAAAAGGAGTCTACCCTACATCTGGTTCTGCGTCTGCGTGGAGGCC 27322 >seq355 Length=31638 Score = 105 bits (116), Expect = 7e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || ||||| || || |||||| | || || ||| || Sbjct 6469 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATCACCCTTGAGGTTGAGTCC 6410 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || || |||| || || ||||| |||||| | || Sbjct 6409 TCAGACACCATCGACAATGTCAAGTCTAAGATCCAGGATAAGGAGGGCATTCCCCCGGAT 6350 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 |||||||| || || | ||| ||||| ||||| || || | |||||||| ||||||| Sbjct 6349 CAACAGCGCCTGATCTTCGCTGGCAAGCAGCTAGAGGATGGCCGCACCCTGTCCGACTAC 6290 Query 38421 AACATCCAAAAGG 38433 |||||||| |||| Sbjct 6289 AACATCCAGAAGG 6277 >seq24 Length=141979 Score = 96.9 bits (106), Expect = 3e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| | || |||||| || | |||| | Sbjct 81089 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCCTCGGACACGATC 81148 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || || |||| ||||| ||||| |||||| | ||||||||||| || Sbjct 81149 GACAACG-TCAAGTCCAAGATCCAAGACAAGGAGGGCATTCCCCCGGACCAACAGCGCCT 81207 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | ||| ||||| ||||| || || | ||||| | |||||||||||||| || Sbjct 81208 GATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTTTGTCTGACTACAACATCCAGAA 81267 Query 38432 GG 38433 || Sbjct 81268 GG 81269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500167091777920