Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq425 102 9e-17
>seq425
Length=119061
Score = 102 bits (112), Expect = 9e-17
Identities = 357/557 (64%), Gaps = 3/557 (1%)
Strand=Plus/Plus
Query 18961 CATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAA 19020
|| ||||| ||| || || ||||| || | |||| || |||||||| || |
Sbjct 45572 CAGGCAAAGTCAGTGTGCAGACCCTCATCACGGGAAATCAGCTCGTTAGAAAAGGTCAGG 45631
Query 19021 CCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAAT 19080
|| |||||||| || | || | ||| || ||||| ||||| | ||||||||||||
Sbjct 45632 CCGGGCATCAGACCACGCTTGCGCAGCCAAAAGATAGAGGCAAAGGCTCCAGAAAAGAAG 45691
Query 19081 ATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGA 19140
|| || || || || |||||||| | ||| | | || || | | || | |
Sbjct 45692 ATGCCCTCGACGGCAGCAAAAGCGATTAGGCGCTGAGCAAAAGTTGATTCTCTGTCGCAG 45751
Query 19141 ATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTA 19200
|||||||| || ||||| || || || || || || || || || |||| ||
Sbjct 45752 ATCCATTTGAGAGCCCAGTCGGCTTTGCGGCGTATGCAGGGAATGGTGTCAATAGCGTTG 45811
Query 19201 AATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATT 19260
|| || ||| | |||| | | || || | ||| | ||| ||||| ||| ||| |
Sbjct 45812 AACAGGTACGTGCGCTGGGCAGGCTCCTTGATATAAGTATCGATCAACAAAGAGTAGGTC 45871
Query 19261 TCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATC 19320
|| || || || || || || ||||| || || || || || | || || | |||
Sbjct 45872 TCGGAGTGGATGTTCTCCATCATGATCTGGAAACCATAGAAGCAACGAGCCTCAGGGATC 45931
Query 19321 TGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCA 19380
|| || || | | | || | || |||| || || || || || |||||| || |||
Sbjct 45932 TGGACCTCGCCAGAGAAACGCTCAACCAGGTTCTCGTTGACAATGCCATCAGAGGCAGCA 45991
Query 19381 AAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTA---ATGTATTCCAA 19437
|| || || | | || || || | | || || ||| | | |||||
Sbjct 45992 AAGAAGGCCAGAATGTGAGAGATGAAGTACTGCTCGTCCTTGGTAAGCCGGTTGTTCCAG 46051
Query 19438 TCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTT 19497
|| | | |||||| |||| ||| | || ||| | ||||| || || ||||| || ||
Sbjct 46052 TCGTGGAGATCTTTGGATAGATCAATCTCCTCAGCAGTCCAGAACGAGGCCTCAGCCTTC 46111
Query 19498 TTATACATGTTCCATAT 19514
|||||||| | ||| ||
Sbjct 46112 TTATACATCTGCCAGAT 46128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562102384933320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |