Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq514 134 1e-25 seq366 102 7e-16 >seq514 Length=36044 Score = 134 bits (148), Expect = 1e-25 Identities = 450/695 (65%), Gaps = 9/695 (1%) Strand=Plus/Plus Query 551895 GCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACT 551954 || || |||||||| | || |||||||| | ||||| || |||| || || | | Sbjct 18042 GCCCTACGTCGTCTTCGCACCGCTTGCGAGCGTGCCAAGCGCACTCTGTCCTCGTCTGCC 18101 Query 551955 CAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG 552014 || ||| | ||||| | ||||| | || ||||| || |||| | || | ||| | Sbjct 18102 CAGACCTCCATTGAGATCGATTCTCTGTTCGAGGGTATCGATTTCTACACCTCGATTACT 18161 Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 | ||| ||||| || | || ||||| || | || | | || || || Sbjct 18162 CGTGCCCGTTTTGAGGAGCTGTGCCAGGATCTTTTCCGTTCCACCCTGCAGCCTGTCGAC 18221 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 | ||| | | ||| | |||||||| || || || || || || || || || ||| Sbjct 18222 CGTGTTCTGACTGATGCCAAGATTGACAAGTCTCTGGTTCACGAGATCGTCCTGGTCGGT 18281 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCT---TATTTCAATGGTAAA 552191 || || || | |||||| |||| ||| | | | ||| || ||||| || || Sbjct 18282 GGTTCCACCCGTATTCCTCGCATTCA-GAA--GCTCATTTCCGACTACTTCAACGGCAAG 18338 Query 552192 AAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCA 552251 | || | || |||| || ||||||||||||||||| |||||||| | || || Sbjct 18339 GAGCCCAACAAGAGCATTAACCCCGATGAGGCTGTTGCCTACGGTGCCGCTGTCCAGGCT 18398 Query 552252 GCTATTCTTTCTGGACA-AACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTT 552308 |||||||| ||||| | | || || || || || | ||| | ||| | |||||| Sbjct 18399 GCTATTCTGTCTGGTGACACCTCCAACAAGACCACCAACGAGATTCTGCTTCTCGATGTT 18458 Query 552309 ACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGA 552368 ||||||| ||||| ||| | || || | || ||||| ||||| || || || | Sbjct 18459 GCTCCTCTGTCTCTGGGTATTGAGACTGCCGGTGGTATGATGACCAAGCTAATTCCCCGT 18518 Query 552369 AATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACT 552428 || || || || || ||| || ||| || || ||||| | || || || || | Sbjct 18519 AACACCACCATCCCCACTAAGAAGTCTGAGGTTTTCTCTACCTTCTCCGACAACCAGCCC 18578 Query 552429 GCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT 552488 | |||| ||||| | | || || || | | || || || || || | || Sbjct 18579 GGTGTTTTGATTCAGGTCTACGAGGGTGAGCGCCAGCGTACCAAGGACAACAACCTGCTG 18638 Query 552489 GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTT 552548 |||| || | | ||||| || |||||||||||||| ||||| || ||||| || Sbjct 18639 GGTAAGTTCGAGCTTACCGGTATCCCCCCTGCTCCTCGTGGTGTACCCCAGATTGAGGTC 18698 Query 552549 ACTTTCGATATCGATGCCAATGGAATTTTGAATGT 552583 || |||||| | |||||||| || || |||| || Sbjct 18699 ACCTTCGATTTGGATGCCAACGGTATCATGAACGT 18733 >seq366 Length=80546 Score = 102 bits (112), Expect = 7e-16 Identities = 156/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || ||||| |||||| || || ||| ||||| || | || || | Sbjct 27333 AGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGG 27392 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| || || || || ||||||||||| || | |||||||| ||||| || || || Sbjct 27393 CCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGGATACCCTCC 27452 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGT 563435 ||||||||||| || ||| || ||||| ||||||| || | | || || || Sbjct 27453 TTATCTTGAATCTTCGATTTGACATTGTCAATAGTATCAG-AAGACTCAACCTCAAGGGT 27511 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| ||||| ||||| || ||||| ||||||||| Sbjct 27512 GATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCATA 27551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029247716442370