Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq366 129 4e-24
seq514 91.5 1e-12
>seq366
Length=80546
Score = 129 bits (142), Expect = 4e-24
Identities = 162/220 (74%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
||| ||||| || || ||||| || ||| || || || || || || | || ||
Sbjct 27329 ACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGT 27388
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
| | ||| || || ||||| || |||||||| ||||| || ||||| ||||| || ||
Sbjct 27389 ACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGGATACC 27448
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729
||||| ||||||||||| ||||||| ||||||||||||| | | || ||||
Sbjct 27449 CTCCTTATCTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAA-CCTCAA 27507
Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
|||| || ||||| || ||||||||||| ||||| |||||
Sbjct 27508 GGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTG 27547
>seq514
Length=36044
Score = 91.5 bits (100), Expect = 1e-12
Identities = 168/241 (70%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 474638 GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAA 474697
|| || || || || ||| | || || | || || || |||||| | ||| |||
Sbjct 17433 GGCGAGACCAAGCAGTTTACCCCCGAGGAGATCTCCTCTATGGTTCTGATCAAGATGCGT 17492
Query 474698 CAAACCGC-GAGCTCATATCTTGG-ACAAGAAGTAACTGATGCAGTAATTACTGTTCCAG 474755
| ||||| ||| || || ||||| || | |||| | || || || |||||||| |
Sbjct 17493 GAGACCGCTGAG-TCGTACCTTGGTACCACCGTTAACA-ACGCTGTTATCACTGTTCCTG 17550
Query 474756 CATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTA 474815
| || || || |||||||| ||||| || || || || | || ||||| ||||| |
Sbjct 17551 CCTACTTCAACGATTCTCAGCGTCAGGCTACCAAGGACTCCGGTCTTATTGCCGGTCTGA 17610
Query 474816 ATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875
|||| | ||||| ||||| || || || || || || |||| || |||||||||||||
Sbjct 17611 ATGTCCTGCGTATCATTAACGAGCCCACTGCCGCTGCCATTGCCTACGGTCTTGATAAGA 17670
Query 474876 A 474876
|
Sbjct 17671 A 17671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268140037000124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |