Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016- 10-16] 913 sequences; 32,456,232 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq366 129 4e-24 seq514 91.5 1e-12 >seq366 Length=80546 Score = 129 bits (142), Expect = 4e-24 Identities = 162/220 (74%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || ||||| || ||| || || || || || || | || || Sbjct 27329 ACGCAGACGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGT 27388 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||| || || ||||| || |||||||| ||||| || ||||| ||||| || || Sbjct 27389 ACGGCCATCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGGATACC 27448 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||| ||||||||||| ||||||| ||||||||||||| | | || |||| Sbjct 27449 CTCCTTATCTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAA-CCTCAA 27507 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || ||||| || ||||||||||| ||||| ||||| Sbjct 27508 GGGTGATGGTTTTGCCAGTGAGAGTCTTGACGAAGATTTG 27547 >seq514 Length=36044 Score = 91.5 bits (100), Expect = 1e-12 Identities = 168/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 474638 GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAA 474697 || || || || || ||| | || || | || || || |||||| | ||| ||| Sbjct 17433 GGCGAGACCAAGCAGTTTACCCCCGAGGAGATCTCCTCTATGGTTCTGATCAAGATGCGT 17492 Query 474698 CAAACCGC-GAGCTCATATCTTGG-ACAAGAAGTAACTGATGCAGTAATTACTGTTCCAG 474755 | ||||| ||| || || ||||| || | |||| | || || || |||||||| | Sbjct 17493 GAGACCGCTGAG-TCGTACCTTGGTACCACCGTTAACA-ACGCTGTTATCACTGTTCCTG 17550 Query 474756 CATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTA 474815 | || || || |||||||| ||||| || || || || | || ||||| ||||| | Sbjct 17551 CCTACTTCAACGATTCTCAGCGTCAGGCTACCAAGGACTCCGGTCTTATTGCCGGTCTGA 17610 Query 474816 ATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGA 474875 |||| | ||||| ||||| || || || || || || |||| || ||||||||||||| Sbjct 17611 ATGTCCTGCGTATCATTAACGAGCCCACTGCCGCTGCCATTGCCTACGGTCTTGATAAGA 17670 Query 474876 A 474876 | Sbjct 17671 A 17671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268140037000124