Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Endoconidiophora_20polonica_20[genbank_20GCA_5F001856765.1_202016-
10-16] 913 sequences; 32,456,232 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq366 122 2e-22
>seq366
Length=80546
Score = 122 bits (134), Expect = 2e-22
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205
|| || |||||||| | |||| ||| || ||| || |||||||| | || | |
Sbjct 27336 CGCAGAACCAGATGTAGGGTAGACTCCTTTTGAATGTTGTAGTCGGAGAGGGTACGGCCA 27395
Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265
|| || | || || ||||||||||| | | ||| ||||| ||||| || || || |||
Sbjct 27396 TCCTCCAGCTGCTTGCCGGCAAAAATCAGACGCTGCTGATCCGGAGGGATACCCTCCTTA 27455
Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325
||||| || || | ||| | ||| ||||||||| ||||||||||| || || || ||
Sbjct 27456 TCTTGAATCTTCGATTTGACATTGTCAATAGTATCAGAAGACTCAACCTCAAGGGTGATG 27515
Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
||||| || || || || || || || ||||||||
Sbjct 27516 GTTTTGCCAGTGAGAGTCTTGACGAAGATTTGCAT 27550
Score = 91.5 bits (100), Expect = 3e-13
Identities = 145/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|||||||| | || || || ||||| || | |||| ||| || ||||| ||||||
Sbjct 27918 ATACCACCACGCAGGCGGAGGACCAGGTGGAGAGTAGACTCCTTCTGGATATTGTAGTCG 27977
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|| | || | | || || | ||| |||||||| ||||||| | ||| || || ||
Sbjct 27978 GACAGGGTGCGACCGTCCTCAAGTTGCTTTCCGGCGAAAATTAGACGCTGCTGGTCTGGG 28037
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || || || ||||| || || || | || | ||| || || |||||||||||
Sbjct 28038 GGAATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATGGTGTCGGAAGACTCG 28097
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTA 193338
|| || ||||| || || || || ||||
Sbjct 28098 ACCTCGAGAGTGATGGTCTTGCCGGTTA 28125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899644132694160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |